Z. japonica Nagirizaki
Zjn_sc00027.1.g02060.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G28910.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 435 1 410 5e-45 97.7 35.6 48.7
Subject 425 1 406
Annot | Symbols: NINJA | novel interactor of JAZ | chr4:14264330-14265680 REVERSE LENGTH=425
NR ref|XP_004961252.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 435 1 433 0.0 109.9 82.1 88.7
Subject 478 1 475
Annot PREDICTED: ninja-family protein 8 [Setaria italica]
IRGSP Os05t0558800-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 435 1 433 0.0 103.7 79.1 86.2
Subject 451 1 448
Annot
Sbicolor Sobic.009G228700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 435 1 433 e-180 109 80.9 87.8
Subject 474 1 471
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g02060.1.sm.mkhc length: 435 aa.
IPR012463 Ninja
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 8.5e-18 359-409
no_ID  
HMMPanther PTHR31413 FAMILY 1.6e-12 322-409
HMMPanther PTHR31413:SF0 SUBFAMILY 1.6e-12 322-409
Seg seg seg NA 6-20
211-220
Pseudomolecule
Chromosome Start End Strand
181040762410409633+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 770172 770768 . - . ID=Zjn_sc00027.1.g02060.1.sm.mkhc:exon:3
Zjn_sc00027.1 maker exon 771173 771386 . - . ID=Zjn_sc00027.1.g02060.1.sm.mkhc:exon:2
Zjn_sc00027.1 maker exon 771447 772181 . - . ID=Zjn_sc00027.1.g02060.1.sm.mkhc:exon:1

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