Z. japonica Nagirizaki
Zjn_sc00027.1.g01870.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G53000.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 147 46 146 8e-30 197.3 44.9 51
Subject 290 194 289
Annot | Symbols: KDSB | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:19745330-19747133 REVERSE LENGTH=290
NR ref|XP_006654782.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 147 54 147 2e-32 203.4 51 52.4
Subject 299 209 299
Annot PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Oryza brachyantha]
IRGSP Os05t0561500-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 147 54 147 2e-35 202 51 52.4
Subject 297 207 297
Annot
Sbicolor Sobic.009G231100.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 147 68 147 3e-34 201.4 46.9 47.6
Subject 296 217 296
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g01870.1.sm.mkhc length: 147 aa.
IPR003329 Acylneuraminate cytidylyltransferase
method AccNumber shortName E-value location
Biological Process GO:0009103 lipopolysaccharide biosynthetic process    
HMMPfam PF02348 CTP_transf_3 2e-07 54-80
IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity    
Biological Process GO:0009103 lipopolysaccharide biosynthetic process    
HMMPanther PTHR21485:SF4 CMP-2-KETO-3-DEOCTULOSONATE 1.6e-27 79-146
no_ID  
Gene3D G3DSA:3.90.550.10 no description 6.1e-14 51-79
80-144
HMMPanther PTHR21485 CMP-N-ACETYLNEURAMINIC 1.6e-27 79-146
Seg seg seg NA 5-17
25-47
91-111
superfamily SSF53448 Nucleotide-diphospho-sugar 4.3e-08 82-141
51-80
Pseudomolecule
Chromosome Start End Strand
181048347410485535-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 694270 694509 . + . ID=Zjn_sc00027.1.g01870.1.sm.mkhc:exon:1
Zjn_sc00027.1 maker exon 695545 695655 . + . ID=Zjn_sc00027.1.g01870.1.sm.mkhc:exon:2
Zjn_sc00027.1 maker exon 695955 696331 . + . ID=Zjn_sc00027.1.g01870.1.sm.mkhc:exon:3

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