Z. japonica Nagirizaki
Zjn_sc00027.1.g00720.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G27680.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 663 352 663 e-111 78.1 33.2 39.7
Subject 518 75 518
Annot | Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518
NR ref|XP_004961109.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 663 282 663 e-177 78.1 51.3 54.4
Subject 518 1 518
Annot PREDICTED: glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic [Setaria italica] gi|835953798|ref|XP_012700353.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic [Setaria italica]
IRGSP Os01t0633100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 663 282 663 e-136 78.1 40.1 48.4
Subject 518 1 518
Annot
Sbicolor Sobic.003G230500.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 663 282 663 e-126 86.3 39.2 46.9
Subject 572 56 572
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g00720.1.sm.mk length: 663 aa.
IPR005835 Nucleotidyl transferase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF00483 NTP_transferase 1.1e-29 364-484
IPR005836 ADP-glucose pyrophosphorylase, conserved site
Biological Process GO:0005978 glycogen biosynthetic process    
Molecular Function GO:0008878 glucose-1-phosphate adenylyltransferase activity    
PatternScan PS00808 ADP_GLC_PYROPHOSPH_1 NA 368-387
PatternScan PS00809 ADP_GLC_PYROPHOSPH_2 NA 457-465
IPR011004 Trimeric LpxA-like
superfamily SSF51161 Trimeric 2.1e-12 575-663
no_ID  
Gene3D G3DSA:3.90.550.10 no description 9.9e-08 363-474
594-629
HMMPanther PTHR22572 SUGAR-1-PHOSPHATE 1.3e-119 349-663
HMMPanther PTHR22572:SF10 GLUCOSE-1-PHOSPHATE 1.3e-119 349-663
Seg seg seg NA 42-59
94-105
110-126
superfamily SSF53448 Nucleotide-diphospho-sugar 5.5e-42 362-625
Pseudomolecule
Chromosome Start End Strand
181086867710873709-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker_non_over exon 306096 306642 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:1
Zjn_sc00027.1 maker_non_over exon 306681 306739 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:2
Zjn_sc00027.1 maker_non_over exon 306801 306899 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:3
Zjn_sc00027.1 maker_non_over exon 307155 307229 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:4
Zjn_sc00027.1 maker_non_over exon 307414 307463 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:5
Zjn_sc00027.1 maker_non_over exon 307789 307996 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:6
Zjn_sc00027.1 maker_non_over exon 308103 308222 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:7
Zjn_sc00027.1 maker_non_over exon 308672 308842 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:8
Zjn_sc00027.1 maker_non_over exon 308982 309071 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:9
Zjn_sc00027.1 maker_non_over exon 309438 309572 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:10
Zjn_sc00027.1 maker_non_over exon 310095 310175 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:11
Zjn_sc00027.1 maker_non_over exon 310306 310392 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:12
Zjn_sc00027.1 maker_non_over exon 310684 310790 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:13
Zjn_sc00027.1 maker_non_over exon 310877 310937 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:14
Zjn_sc00027.1 maker_non_over exon 311027 311128 . + . ID=Zjn_sc00027.1.g00720.1.sm.mk:exon:15

Top