Z. japonica Nagirizaki
Zjn_sc00026.1.g02430.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G03290.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 82 407 e-175 91.4 70.2 75.6
Subject 374 44 369
Annot | Symbols: IDH-V | isocitrate dehydrogenase V | chr5:794043-795939 FORWARD LENGTH=374
NR ref|XP_008655019.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 43 407 0.0 103.7 84.1 86.6
Subject 424 47 419
Annot PREDICTED: 3-isopropylmalate dehydrogenase isoform X1 [Zea mays] gi|413946894|gb|AFW79543.1| 3-isopropylmalate dehydrogenase [Zea mays]
IRGSP Os01t0276100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 51 407 0.0 88.5 83.1 84.8
Subject 362 1 357
Annot
Sbicolor Sobic.003G129900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 51 407 0.0 89.2 83.1 84.8
Subject 365 1 360
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00026.1.g02430.1.sm.mkhc length: 409 aa.
IPR001804 Isocitrate and isopropylmalate dehydrogenases family
method AccNumber shortName E-value location
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11835 DECARBOXYLATING 9e-201 35-407
IPR004434 Isocitrate dehydrogenase NAD-dependent
Molecular Function GO:0004449 isocitrate dehydrogenase (NAD+) activity    
Biological Process GO:0006099 tricarboxylic acid cycle    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00175 mito_nad_idh: 6.1e-146 82-407
IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00470 IDH_IMDH NA 303-322
IPR024084 Isopropylmalate dehydrogenase-like domain
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.718.10 no description 4.5e-139 80-407
HMMPfam PF00180 Iso_dh 6.1e-105 85-407
no_ID  
Seg seg seg NA 16-40
superfamily SSF53659 Isocitrate/Isopropylmalate 1.4e-121 56-407
Pseudomolecule
Chromosome Start End Strand
610895341094185+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00026.1 maker exon 1089534 1089681 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:1
Zjn_sc00026.1 maker exon 1089941 1090098 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:2
Zjn_sc00026.1 maker exon 1092215 1092535 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:3
Zjn_sc00026.1 maker exon 1092609 1092770 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:4
Zjn_sc00026.1 maker exon 1092868 1092942 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:5
Zjn_sc00026.1 maker exon 1093068 1093177 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:6
Zjn_sc00026.1 maker exon 1093254 1093326 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:7
Zjn_sc00026.1 maker exon 1093711 1093884 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:8
Zjn_sc00026.1 maker exon 1094177 1094185 . + . ID=Zjn_sc00026.1.g02430.1.sm.mkhc:exon:9

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