Z. japonica Nagirizaki
Zjn_sc00026.1.g00710.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G61530.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 54 375 e-126 84.3 51.4 62.4
Subject 354 21 333
Annot | Symbols: PANB2 | Phosphoenolpyruvate carboxylase family protein | chr3:22771692-22773313 REVERSE LENGTH=354
NR ref|XP_002454904.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 39 374 e-141 96.2 63.8 69.3
Subject 404 28 363
Annot hypothetical protein SORBIDRAFT_03g001180 [Sorghum bicolor] gi|241926879|gb|EES00024.1| hypothetical protein SORBIDRAFT_03g001180 [Sorghum bicolor]
IRGSP Os01t0225500-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 83 374 e-123 95 52.4 61.2
Subject 399 82 371
Annot
Sbicolor Sobic.003G011600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 420 39 374 e-144 96.2 63.8 69.3
Subject 404 28 363
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00026.1.g00710.1.sm.mk length: 420 aa.
IPR003700 Ketopantoate hydroxymethyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity    
Biological Process GO:0015940 pantothenate biosynthetic process    
HAMAP MF_00156 PanB 40.686 85-352
HMMPanther PTHR20881 3-METHYL-2-OXOBUTANOATE 6.5e-158 79-413
HMMPfam PF02548 Pantoate_transf 3.9e-104 83-348
HMMTigr TIGR00222 panB: 9.4e-89 86-350
IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.60 no description 4.8e-114 83-351
superfamily SSF51621 Phosphoenolpyruvate/pyruvate 1e-100 84-351
no_ID  
Seg seg seg NA 26-37
261-279
Pseudomolecule
Chromosome Start End Strand
6317717319298+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00026.1 maker_non_over exon 317717 318247 . + . ID=Zjn_sc00026.1.g00710.1.sm.mk:exon:1
Zjn_sc00026.1 maker_non_over exon 318481 318834 . + . ID=Zjn_sc00026.1.g00710.1.sm.mk:exon:2
Zjn_sc00026.1 maker_non_over exon 318921 319298 . + . ID=Zjn_sc00026.1.g00710.1.sm.mk:exon:3

Top