Z. japonica Nagirizaki
Zjn_sc00026.1.g00100.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G44160.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 10 299 2e-93 128.7 51.4 59.7
Subject 466 34 349
Annot | Symbols: NUC | C2H2-like zinc finger protein | chr5:17773091-17775513 FORWARD LENGTH=466
NR gb|EEC70289.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 12 359 e-117 136.7 69.9 78.5
Subject 495 31 481
Annot hypothetical protein OsI_01118 [Oryza sativa Indica Group]
IRGSP Os01t0242200-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 12 359 e-119 114.6 67.7 76.5
Subject 415 31 401
Annot
Sbicolor Sobic.003G001300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 13 359 e-119 132.9 70.2 76
Subject 481 43 467
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00026.1.g00100.1.sm.mk length: 362 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00096 zf-C2H2 0.001 47-69
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 49-69
ProfileScan PS50157 ZINC_FINGER_C2H2_2 11.614 47-69
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00058 47-69
111-144
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.1e+02 47-69
88-118
123-143
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 6.3e-124 1-181
HMMPanther PTHR10593:SF17 SUBFAMILY 6.3e-124 1-181
Seg seg seg NA 194-205
superfamily SSF57667 C2H2 0.0001 118-161
29-70
Pseudomolecule
Chromosome Start End Strand
63987744263-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00026.1 maker_non_over exon 39877 39887 . - . ID=Zjn_sc00026.1.g00100.1.sm.mk:exon:3
Zjn_sc00026.1 maker_non_over exon 43112 44107 . - . ID=Zjn_sc00026.1.g00100.1.sm.mk:exon:2
Zjn_sc00026.1 maker_non_over exon 44182 44263 . - . ID=Zjn_sc00026.1.g00100.1.sm.mk:exon:1

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