Z. japonica Nagirizaki
Zjn_sc00025.1.g04800.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G05300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 350 26 341 5e-91 102.9 49.4 63.7
Subject 360 29 343
Annot | Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360
NR ref|XP_004961773.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 350 7 337 e-136 101.1 72.3 80.6
Subject 354 6 333
Annot PREDICTED: zinc transporter 9-like [Setaria italica]
IRGSP Os05t0472700-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 350 3 341 e-115 100.9 60.6 74.3
Subject 353 4 336
Annot
Sbicolor Sobic.007G064900.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 350 7 337 e-129 103.7 74.3 82
Subject 363 6 342
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00025.1.g04800.1.sm.mkhc length: 350 aa.
IPR003689 Zinc/iron permease
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046873 metal ion transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF02535 Zip 2.2e-65 45-329
IPR004698 Zinc/iron permease, fungal/plant
Molecular Function GO:0005385 zinc ion transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0071577 zinc ion transmembrane transport    
HMMTigr TIGR00820 zip: 2.7e-122 32-340
no_ID  
HMMPanther PTHR11040 ZINC/IRON 3.3e-149 32-339
HMMPanther PTHR11040:SF1 ZINC/IRON 3.3e-149 32-339
Seg seg seg NA 2-26
27-37
168-179
Pseudomolecule
Chromosome Start End Strand
1882107828213520+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00025.1 maker exon 2850438 2851058 . + . ID=Zjn_sc00025.1.g04800.1.sm.mkhc:exon:1
Zjn_sc00025.1 maker exon 2851142 2851291 . + . ID=Zjn_sc00025.1.g04800.1.sm.mkhc:exon:2
Zjn_sc00025.1 maker exon 2852284 2852523 . + . ID=Zjn_sc00025.1.g04800.1.sm.mkhc:exon:3
Zjn_sc00025.1 maker exon 2853135 2853176 . + . ID=Zjn_sc00025.1.g04800.1.sm.mkhc:exon:4

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