Z. japonica Nagirizaki
Zjn_sc00025.1.g04670.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33070.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 440 9 267 e-113 138 45.2 50
Subject 607 13 266
Annot | Symbols: | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607
NR gb|EMT10366.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 440 35 420 e-177 92.3 69.8 73.9
Subject 406 27 406
Annot Pyruvate decarboxylase isozyme 2 [Aegilops tauschii]
IRGSP Os05t0469600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 440 1 267 e-137 137.5 53.2 57
Subject 605 1 264
Annot
Sbicolor Sobic.009G169000.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 440 1 267 e-136 138.4 53.4 57
Subject 609 1 268
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00025.1.g04670.1.sm.mkhc length: 440 aa.
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02775 TPP_enzyme_C 3.5e-15 268-391
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 4.7e-37 47-213
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 3.1e-141 46-420
no_ID  
Coil coil coiled-coil NA 364-385
Gene3D G3DSA:3.40.50.970 no description 1.6e-41 46-227
267-406
HMMPanther PTHR18968 THIAMINE 3.1e-141 46-420
Seg seg seg NA 34-46
238-252
368-383
421-432
superfamily SSF52518 Thiamin 3.8e-36 45-230
267-420
Pseudomolecule
Chromosome Start End Strand
1881370918142702+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00025.1 maker exon 2776747 2777371 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:1
Zjn_sc00025.1 maker exon 2777455 2777618 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:2
Zjn_sc00025.1 maker exon 2777717 2777816 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:3
Zjn_sc00025.1 maker exon 2778467 2778571 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:4
Zjn_sc00025.1 maker exon 2778664 2779019 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:5
Zjn_sc00025.1 maker exon 2782295 2782358 . + . ID=Zjn_sc00025.1.g04670.1.sm.mkhc:exon:6

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