Z. japonica Nagirizaki
Zjn_sc00025.1.g03890.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G55610.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 558 1 550 0.0 111.5 72 86.6
Subject 622 1 550
Annot | Symbols: P5CS2 | delta 1-pyrroline-5-carboxylate synthase 2 | chr3:20625005-20628989 REVERSE LENGTH=622
NR gb|AGW20994.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 558 1 550 0.0 128.3 89.8 94.8
Subject 716 1 550
Annot delta 1-pyrroline-5-carboxylate synthetase 2 [Saccharum hybrid cultivar]
IRGSP Os05t0455500-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 558 1 550 0.0 101.6 84.6 93.4
Subject 567 1 550
Annot
Sbicolor Sobic.009G160100.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 558 1 550 0.0 128.3 88.7 94.8
Subject 716 1 550
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00025.1.g03890.1.sm.mkhc length: 558 aa.
IPR001048 Aspartate/glutamate/uridylate kinase
method AccNumber shortName E-value location
Biological Process GO:0008652 cellular amino acid biosynthetic process    
Gene3D G3DSA:3.40.1160.10 no description 7e-49 15-282
HMMPfam PF00696 AA_kinase 1.7e-33 15-260
superfamily SSF53633 Carbamate 1.8e-55 15-283
IPR001057 Glutamate/acetylglutamate kinase
Molecular Function GO:0004349 glutamate 5-kinase activity    
Biological Process GO:0006561 proline biosynthetic process    
FPrintScan PR00474 GLU5KINASE 1.7e-58 52-66
96-124
136-157
175-202
234-254
IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase
Molecular Function GO:0004349 glutamate 5-kinase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006561 proline biosynthetic process    
HAMAP MF_00456 ProB 28.744 14-285
HMMTigr TIGR01027 proB: 4.1e-63 15-285
IPR005766 Delta l-pyrroline-5-carboxylate synthetase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006561 proline biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR01092 P5CS: 1.3e-285 8-548
IPR016161 Aldehyde/histidinol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF53720 ALDH-like 5.4e-51 291-547
IPR016162 Aldehyde dehydrogenase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.605.10 no description 4.1e-80 293-519
IPR016163 Aldehyde dehydrogenase, C-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.309.10 no description 3.9e-06 520-547
IPR019797 Glutamate 5-kinase, conserved site
Molecular Function GO:0004349 glutamate 5-kinase activity    
Biological Process GO:0006561 proline biosynthetic process    
PatternScan PS00902 GLUTAMATE_5_KINASE NA 232-249
no_ID  
HMMPanther PTHR11063 GLUTAMATE 3.6e-292 1-546
HMMPanther PTHR11063:SF2 DELTA 3.6e-292 1-546
Seg seg seg NA 31-41
110-123
187-201
476-488
Pseudomolecule
Chromosome Start End Strand
1877678837781273-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00025.1 maker exon 2407539 2407574 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:14
Zjn_sc00025.1 maker exon 2413702 2413805 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:13
Zjn_sc00025.1 maker exon 2413896 2413992 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:12
Zjn_sc00025.1 maker exon 2414063 2414149 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:11
Zjn_sc00025.1 maker exon 2414243 2414329 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:10
Zjn_sc00025.1 maker exon 2414433 2414522 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:9
Zjn_sc00025.1 maker exon 2414629 2414706 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:8
Zjn_sc00025.1 maker exon 2416997 2417161 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:7
Zjn_sc00025.1 maker exon 2417253 2417403 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:6
Zjn_sc00025.1 maker exon 2418031 2418308 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:5
Zjn_sc00025.1 maker exon 2418518 2418679 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:4
Zjn_sc00025.1 maker exon 2418773 2418979 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:3
Zjn_sc00025.1 maker exon 2419056 2419127 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:2
Zjn_sc00025.1 maker exon 2420663 2420929 . - . ID=Zjn_sc00025.1.g03890.1.sm.mkhc:exon:1

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