Z. japonica Nagirizaki
Zjn_sc00025.1.g02190.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G01720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 555 256 512 3e-91 52.1 30.1 33.9
Subject 289 5 240
Annot | Symbols: ATAF1, ANAC002 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289
NR ref|XP_002439823.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 555 254 551 e-130 60.2 43.8 46.3
Subject 334 16 331
Annot hypothetical protein SORBIDRAFT_09g020750 [Sorghum bicolor] gi|241945108|gb|EES18253.1| hypothetical protein SORBIDRAFT_09g020750 [Sorghum bicolor]
IRGSP Os01t0884300-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 555 254 555 e-112 54.6 39.8 42.9
Subject 303 5 303
Annot
Sbicolor Sobic.009G142200.2.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 555 254 551 e-133 60.2 43.8 46.3
Subject 334 16 331
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00025.1.g02190.1.am.mk length: 555 aa.
IPR003441 NAC domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02365 NAM 1.2e-47 258-382
ProfileScan PS51005 NAC 59.081 258-409
superfamily SSF101941 NAC 3.4e-59 242-410
no_ID  
HMMPanther PTHR31719 FAMILY 7.5e-131 242-552
Seg seg seg NA 23-39
66-76
174-192
437-462
Pseudomolecule
Chromosome Start End Strand
1868778806881022+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00025.1 maker_non_over exon 1517536 1517828 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:1
Zjn_sc00025.1 maker_non_over exon 1517970 1518009 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:2
Zjn_sc00025.1 maker_non_over exon 1518734 1519133 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:3
Zjn_sc00025.1 maker_non_over exon 1519253 1519432 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:4
Zjn_sc00025.1 maker_non_over exon 1519559 1519836 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:5
Zjn_sc00025.1 maker_non_over exon 1520202 1520678 . + . ID=Zjn_sc00025.1.g02190.1.am.mk:exon:6

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