Z. japonica Nagirizaki
Zjn_sc00025.1.g01810.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G16440.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 26 281 e-103 103.6 66.5 74.4
Subject 291 33 291
Annot | Symbols: IPP1 | isopentenyl diphosphate isomerase 1 | chr5:5371765-5373575 FORWARD LENGTH=291
NR ref|XP_008649644.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 2 281 e-113 105.3 76.5 84.7
Subject 296 3 296
Annot PREDICTED: isopentenyl-diphosphate Delta-isomerase I-like [Zea mays] gi|413945361|gb|AFW78010.1| hypothetical protein ZEAMMB73_793684 [Zea mays]
IRGSP Os05t0413400-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 12 281 e-111 104.3 72.2 80.8
Subject 293 14 293
Annot
Sbicolor Sobic.009G137700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 37 281 e-113 112.5 73 78.3
Subject 316 43 316
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00025.1.g01810.1.am.mkhc length: 281 aa.
IPR000086 NUDIX hydrolase domain
method AccNumber shortName E-value location
Molecular Function GO:0016787 hydrolase activity    
HMMPfam PF00293 NUDIX 1.3e-21 92-249
ProfileScan PS51462 NUDIX 14.666 90-251
IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1
Molecular Function GO:0004452 isopentenyl-diphosphate delta-isomerase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPIR PIRSF018427 Isopentenyldiphosphate 1.6e-85 43-278
HMMPanther PTHR10885 ISOPENTENYL-DIPHOSPHATE 3.4e-107 80-281
HMMTigr TIGR02150 IPP_isom_1: 6.4e-43 75-252
IPR015797 NUDIX hydrolase domain-like
Molecular Function GO:0016787 hydrolase activity    
Gene3D G3DSA:3.90.79.10 no description 1.5e-45 91-266
superfamily SSF55811 Nudix 2.2e-29 67-266
no_ID  
HMMPanther PTHR10885:SF0 ISOPENTENYL-DIPHOSPHATE 3.4e-107 80-281
Seg seg seg NA 2-34
51-66
Pseudomolecule
Chromosome Start End Strand
1866162966624224+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00025.1 maker exon 1255952 1256243 . + . ID=Zjn_sc00025.1.g01810.1.am.mkhc:exon:1
Zjn_sc00025.1 maker exon 1257241 1257340 . + . ID=Zjn_sc00025.1.g01810.1.am.mkhc:exon:2
Zjn_sc00025.1 maker exon 1262946 1263048 . + . ID=Zjn_sc00025.1.g01810.1.am.mkhc:exon:3
Zjn_sc00025.1 maker exon 1263153 1263317 . + . ID=Zjn_sc00025.1.g01810.1.am.mkhc:exon:4
Zjn_sc00025.1 maker exon 1263396 1263880 . + . ID=Zjn_sc00025.1.g01810.1.am.mkhc:exon:5

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