Z. japonica Nagirizaki
Zjn_sc00024.1.g02950.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G26200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 15 438 e-169 100.2 65.9 75.8
Subject 447 18 442
Annot | Symbols: ACS7, ATACS7 | 1-amino-cyclopropane-1-carboxylate synthase 7 | chr4:13275307-13276946 FORWARD LENGTH=447
NR ref|XP_004963524.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 1 444 0.0 99.8 85.4 89.5
Subject 445 1 445
Annot PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 7-like [Setaria italica]
IRGSP Os05t0196600-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 1 442 0.0 101.3 81.4 87.2
Subject 452 1 447
Annot
Sbicolor Sobic.003G033900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 15 442 0.0 103.8 75.3 81.8
Subject 463 23 452
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00024.1.g02950.1.am.mk length: 446 aa.
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 278-291
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.3e-91 52-433
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.8e-61 89-301
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.3e-17 302-438
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.1e-113 14-438
no_ID  
FPrintScan PR00753 ACCSYNTHASE 6.7e-86 54-80
120-140
142-163
196-220
232-255
272-296
304-327
HMMPanther PTHR11751 SUBGROUP 1.6e-193 24-446
HMMPanther PTHR11751:SF26 ACC 1.6e-193 24-446
Seg seg seg NA 192-203
267-276
Pseudomolecule
Chromosome Start End Strand
1732903003291816-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00024.1 maker_non_over exon 2974396 2975275 . - . ID=Zjn_sc00024.1.g02950.1.am.mk:exon:3
Zjn_sc00024.1 maker_non_over exon 2975379 2975659 . - . ID=Zjn_sc00024.1.g02950.1.am.mk:exon:2
Zjn_sc00024.1 maker_non_over exon 2975733 2975912 . - . ID=Zjn_sc00024.1.g02950.1.am.mk:exon:1

Top