Z. japonica Nagirizaki
Zjn_sc00024.1.g02580.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G64810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 87 1 47 6e-13 223 36.8 47.1
Subject 194 106 168
Annot | Symbols: WRKY51, ATWRKY51 | WRKY DNA-binding protein 51 | chr5:25908415-25909687 FORWARD LENGTH=194
NR ref|NP_001148599.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 87 1 87 1e-24 236.8 77 86.2
Subject 206 105 206
Annot WRKY67 - superfamily of TFs having WRKY and zinc finger domains [Zea mays] gi|195620684|gb|ACG32172.1| WRKY67 - superfamily of TFs having WRKY and zinc finger domains [Zea mays]
IRGSP Os05t0183100-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 87 1 87 1e-18 243.7 67.8 73.6
Subject 212 110 212
Annot
Sbicolor Sobic.009G068900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 87 1 87 1e-26 236.8 74.7 83.9
Subject 206 106 206
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00024.1.g02580.1.sm.mk length: 87 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 1.2e-12 10-46
HMMPfam PF03106 WRKY 8.6e-13 10-46
HMMSmart SM00774 DNA 2.9e-08 4-47
ProfileScan PS50811 WRKY 15.571 10-48
superfamily SSF118290 WRKY 2.4e-10 10-49
Pseudomolecule
Chromosome Start End Strand
1729106962911153-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00024.1 maker_non_over exon 2594792 2595029 . - . ID=Zjn_sc00024.1.g02580.1.sm.mk:exon:2
Zjn_sc00024.1 maker_non_over exon 2595224 2595249 . - . ID=Zjn_sc00024.1.g02580.1.sm.mk:exon:1

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