Z. japonica Nagirizaki
Zjn_sc00024.1.g01880.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G24670.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 87 439 2e-97 99.3 40.4 52.6
Subject 440 80 434
Annot | Symbols: TAR2 | tryptophan aminotransferase related 2 | chr4:12727940-12730694 REVERSE LENGTH=440
NR ref|XP_002440683.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 19 441 e-156 102.9 65.5 74.5
Subject 456 24 456
Annot hypothetical protein SORBIDRAFT_09g005080 [Sorghum bicolor] gi|241945968|gb|EES19113.1| hypothetical protein SORBIDRAFT_09g005080 [Sorghum bicolor]
IRGSP Os01t0169800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 15 441 e-128 114.4 55.1 67.7
Subject 507 67 507
Annot
Sbicolor Sobic.009G060300.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 19 441 e-159 116.3 65.5 74.5
Subject 515 83 515
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00024.1.g01880.1.sm.mk length: 443 aa.
IPR006947 EGF-like, alliinase
method AccNumber shortName E-value location
Molecular Function GO:0016846 carbon-sulfur lyase activity    
Gene3D G3DSA:2.10.25.30 no description 2e-07 86-127
IPR006948 Allinase, C-terminal
Molecular Function GO:0016846 carbon-sulfur lyase activity    
HMMPfam PF04864 Alliinase_C 2.8e-136 89-440
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.6e-47 132-324
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 2.4e-38 333-440
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 5.3e-58 91-440
no_ID  
HMMPanther PTHR11751 SUBGROUP 1e-134 91-443
HMMPanther PTHR11751:SF127SUBFAMILY NOT 1e-134 91-443
ProfileScan PS51257 PROKAR_LIPOPROTEIN 6.000 1-23
Seg seg seg NA 25-42
60-74
338-358
Pseudomolecule
Chromosome Start End Strand
1723605042362244-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00024.1 maker_non_over exon 2044600 2044790 . - . ID=Zjn_sc00024.1.g01880.1.sm.mk:exon:5
Zjn_sc00024.1 maker_non_over exon 2044896 2045194 . - . ID=Zjn_sc00024.1.g01880.1.sm.mk:exon:4
Zjn_sc00024.1 maker_non_over exon 2045302 2045564 . - . ID=Zjn_sc00024.1.g01880.1.sm.mk:exon:3
Zjn_sc00024.1 maker_non_over exon 2045688 2045997 . - . ID=Zjn_sc00024.1.g01880.1.sm.mk:exon:2
Zjn_sc00024.1 maker_non_over exon 2046072 2046340 . - . ID=Zjn_sc00024.1.g01880.1.sm.mk:exon:1

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