Z. japonica Nagirizaki
Zjn_sc00024.1.g01840.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G24670.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 159 517 e-108 84.1 36.9 46.8
Subject 440 76 434
Annot | Symbols: TAR2 | tryptophan aminotransferase related 2 | chr4:12727940-12730694 REVERSE LENGTH=440
NR ref|XP_002439358.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 89 518 0.0 82.6 59.3 69.6
Subject 432 1 431
Annot hypothetical protein SORBIDRAFT_09g005070 [Sorghum bicolor] gi|241944643|gb|EES17788.1| hypothetical protein SORBIDRAFT_09g005070 [Sorghum bicolor]
IRGSP Os05t0169300-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 100 519 e-176 84.3 56 67.5
Subject 441 16 441
Annot
Sbicolor Sobic.009G060100.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 89 518 0.0 82.6 59.3 69.6
Subject 432 1 431
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00024.1.g01840.1.am.mk length: 523 aa.
IPR006947 EGF-like, alliinase
method AccNumber shortName E-value location
Molecular Function GO:0016846 carbon-sulfur lyase activity    
Gene3D G3DSA:2.10.25.30 no description 5.3e-14 135-203
IPR006948 Allinase, C-terminal
Molecular Function GO:0016846 carbon-sulfur lyase activity    
HMMPfam PF04864 Alliinase_C 5e-144 162-518
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 6.2e-58 208-399
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 2.6e-37 410-518
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.6e-73 148-518
no_ID  
HMMPanther PTHR11751 SUBGROUP 4e-188 159-520
HMMPanther PTHR11751:SF127SUBFAMILY NOT 4e-188 159-520
Seg seg seg NA 21-40
63-70
125-142
261-271
Pseudomolecule
Chromosome Start End Strand
1723023292305521+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00024.1 maker_non_over exon 1986425 1986427 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:1
Zjn_sc00024.1 maker_non_over exon 1986724 1986907 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:2
Zjn_sc00024.1 maker_non_over exon 1987004 1987313 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:3
Zjn_sc00024.1 maker_non_over exon 1987445 1987748 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:4
Zjn_sc00024.1 maker_non_over exon 1988099 1988370 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:5
Zjn_sc00024.1 maker_non_over exon 1989013 1989314 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:6
Zjn_sc00024.1 maker_non_over exon 1989421 1989617 . + . ID=Zjn_sc00024.1.g01840.1.am.mk:exon:7

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