Z. japonica Nagirizaki
Zjn_sc00024.1.g00160.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G77120.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 377 0.0 100 81.8 90.5
Subject 379 1 377
Annot | Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehydrogenase 1 | chr1:28975509-28977216 FORWARD LENGTH=379
NR gb|AIN39840.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 379 0.0 100 99.5 99.7
Subject 379 1 379
Annot hypothetical protein [Zoysia matrella]
IRGSP Os11t0210300-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 379 0.0 100 96 98.2
Subject 379 1 379
Annot
Sbicolor Sobic.001G097600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 379 1 379 0.0 100 97.1 99.7
Subject 379 1 379
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00024.1.g00160.1.sm.mkhc length: 379 aa.
IPR002085 Alcohol dehydrogenase superfamily, zinc-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11695 ALCOHOL 3e-192 1-379
IPR002328 Alcohol dehydrogenase, zinc-type, conserved site
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00059 ADH_ZINC NA 68-82
IPR011032 GroES-like
Gene3D G3DSA:3.90.180.10 no description 9e-67 1-197
superfamily SSF50129 GroES-like 2.1e-12 2-201
328-377
IPR013149 Alcohol dehydrogenase, C-terminal
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00107 ADH_zinc_N 5e-24 205-335
IPR013154 Alcohol dehydrogenase GroES-like
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08240 ADH_N 8.1e-24 36-160
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 9.5e-45 198-320
no_ID  
HMMPanther PTHR11695:SF4 ALCOHOL 3e-192 1-379
Seg seg seg NA 198-225
336-347
superfamily SSF51735 NAD(P)-binding 5.6e-53 167-342
Pseudomolecule
Chromosome Start End Strand
17519770523626+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00024.1 maker exon 203866 204178 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:1
Zjn_sc00024.1 maker exon 204788 204924 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:2
Zjn_sc00024.1 maker exon 205027 205073 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:3
Zjn_sc00024.1 maker exon 205856 206181 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:4
Zjn_sc00024.1 maker exon 206260 206342 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:5
Zjn_sc00024.1 maker exon 206425 206500 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:6
Zjn_sc00024.1 maker exon 206581 206642 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:7
Zjn_sc00024.1 maker exon 206726 206821 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:8
Zjn_sc00024.1 maker exon 206914 207075 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:9
Zjn_sc00024.1 maker exon 207368 207722 . + . ID=Zjn_sc00024.1.g00160.1.sm.mkhc:exon:10

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