Z. japonica Nagirizaki
Zjn_sc00023.1.g06100.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G49820.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
447 |
58 |
442 |
e-169 |
94 |
59.7 |
74.3 |
| Subject |
420 |
4 |
417 |
|
| Annot |
| Symbols: ATMTK, MTK | S-methyl-5-thioribose kinase | chr1:18443005-18444907 FORWARD LENGTH=420 |
| NR |
gb|AIE88289.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
447 |
59 |
447 |
0.0 |
200.2 |
75.2 |
82.3 |
| Subject |
895 |
480 |
895 |
|
| Annot |
hypothetical protein OG_BBa0063K01.20 [Oryza glaberrima] |
| IRGSP |
Os04t0669800-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
447 |
59 |
447 |
0.0 |
96.2 |
75.2 |
82.3 |
| Subject |
430 |
15 |
430 |
|
| Annot |
|
| Sbicolor |
Sobic.006G259700.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
447 |
52 |
447 |
0.0 |
95.1 |
79 |
83.9 |
| Subject |
425 |
1 |
425 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00023.1.g06100.1.am.mkhc |
length: 447 aa. |
| IPR002575 |
Aminoglycoside phosphotransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01636 |
APH |
3.6e-14 |
93-303 |
| IPR009212 |
Methylthioribose kinase |
| Biological Process |
GO:0009086 |
methionine biosynthetic process |
|
|
| Molecular Function |
GO:0046522 |
S-methyl-5-thioribose kinase activity |
|
|
| HAMAP |
MF_01683 |
Salvage_MtnK |
143.300 |
23-447 |
| HMMPIR |
PIRSF031134 |
5-methylthioribose |
2.2e-212 |
52-446 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
4.1e-09 |
76-343 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.1200.10 |
no description |
6.1e-10 |
252-305 |
| Seg |
seg |
seg |
NA |
77-88 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 11 | 10429353 | 10432711 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00023.1 |
maker |
exon |
2586955 |
2587557 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:6 |
| Zjn_sc00023.1 |
maker |
exon |
2588001 |
2588215 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:5 |
| Zjn_sc00023.1 |
maker |
exon |
2588793 |
2588994 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:4 |
| Zjn_sc00023.1 |
maker |
exon |
2589381 |
2589468 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:3 |
| Zjn_sc00023.1 |
maker |
exon |
2589552 |
2589861 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:2 |
| Zjn_sc00023.1 |
maker |
exon |
2589960 |
2590313 |
. |
- |
. |
ID=Zjn_sc00023.1.g06100.1.am.mkhc:exon:1 |