Z. japonica Nagirizaki
Zjn_sc00023.1.g05410.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G35630.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 302 e-133 119.1 62 72.3
Subject 430 1 306
Annot | Symbols: GS2, GLN2, ATGSL1 | glutamine synthetase 2 | chr5:13831220-13833239 FORWARD LENGTH=430
NR ref|XP_004960149.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 327 e-154 118.6 74.2 80.3
Subject 428 1 329
Annot PREDICTED: glutamine synthetase, chloroplastic [Setaria italica]
IRGSP Os04t0659100-03_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 1 327 e-151 118.6 73.4 79.2
Subject 428 1 329
Annot
Sbicolor Sobic.006G249400.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 2 327 e-152 119.9 75.1 79.2
Subject 433 3 334
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00023.1.g05410.1.sm.mkhc length: 361 aa.
IPR008146 Glutamine synthetase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004356 glutamate-ammonia ligase activity    
Biological Process GO:0006807 nitrogen compound metabolic process    
HMMPfam PF00120 Gln-synt_C 8.9e-07 159-296
296-339
IPR008147 Glutamine synthetase, beta-Grasp
Molecular Function GO:0004356 glutamate-ammonia ligase activity    
Biological Process GO:0006542 glutamine biosynthetic process    
Biological Process GO:0006807 nitrogen compound metabolic process    
HMMPfam PF03951 Gln-synt_N 4.8e-19 74-152
superfamily SSF54368 Glutamine 1.1e-19 58-158
IPR014746 Glutamine synthetase/guanido kinase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.30.590.10 no description 2e-06 176-296
297-337
IPR027302 Glutamine synthetase, N-terminal conserved site
PatternScan PS00180 GLNA_1 NA 110-127
no_ID  
HMMPanther PTHR20852 GLUTAMINE 5.5e-122 64-344
HMMPanther PTHR20852:SF14 GLUTAMINE 5.5e-122 64-344
Seg seg seg NA 16-35
201-213
347-360
superfamily SSF55931 Glutamine 2.2e-44 158-342
Pseudomolecule
Chromosome Start End Strand
111016116210164665-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00023.1 maker exon 2318764 2319209 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:11
Zjn_sc00023.1 maker exon 2319301 2319361 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:10
Zjn_sc00023.1 maker exon 2320054 2320107 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:9
Zjn_sc00023.1 maker exon 2320398 2320472 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:8
Zjn_sc00023.1 maker exon 2320617 2320745 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:7
Zjn_sc00023.1 maker exon 2320874 2320961 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:6
Zjn_sc00023.1 maker exon 2321067 2321173 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:5
Zjn_sc00023.1 maker exon 2321248 2321296 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:4
Zjn_sc00023.1 maker exon 2321376 2321479 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:3
Zjn_sc00023.1 maker exon 2321616 2321655 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:2
Zjn_sc00023.1 maker exon 2322029 2322267 . - . ID=Zjn_sc00023.1.g05410.1.sm.mkhc:exon:1

Top