Z. japonica Nagirizaki
Zjn_sc00023.1.g05320.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G47770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 227 305 3e-19 125.1 14.7 20.5
Subject 384 127 222
Annot | Symbols: FPS1 | farnesyl diphosphate synthase 1 | chr5:19345297-19347415 FORWARD LENGTH=384
NR gb|EMS60317.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 227 307 4e-37 157 23.8 26.1
Subject 482 153 233
Annot Farnesyl pyrophosphate synthase [Triticum urartu]
IRGSP Os04t0657100-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 227 307 6e-27 127.7 17.6 22.8
Subject 392 135 232
Annot
Sbicolor Sobic.006G248000.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 227 307 2e-25 131.9 16.6 21.8
Subject 405 148 245
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00023.1.g05320.1.am.mk length: 307 aa.
IPR008949 Terpenoid synthase
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.600.10 no description 4.6e-10 227-303
superfamily SSF48576 Terpenoid 2e-10 227-303
no_ID  
HMMPanther PTHR11525 FARNESYL-PYROPHOSPHATE 3.1e-26 227-306
HMMPanther PTHR11525:SF0 SUBFAMILY 3.1e-26 227-306
Seg seg seg NA 14-25
37-49
101-113
Pseudomolecule
Chromosome Start End Strand
111013007310132520-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00023.1 maker_non_over exon 2287675 2287767 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:6
Zjn_sc00023.1 maker_non_over exon 2287860 2287925 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:5
Zjn_sc00023.1 maker_non_over exon 2288079 2288165 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:4
Zjn_sc00023.1 maker_non_over exon 2289007 2289118 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:3
Zjn_sc00023.1 maker_non_over exon 2289262 2289526 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:2
Zjn_sc00023.1 maker_non_over exon 2289822 2290122 . - . ID=Zjn_sc00023.1.g05320.1.am.mk:exon:1

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