Z. japonica Nagirizaki
Zjn_sc00023.1.g04860.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 64 441 3e-65 111.1 31.2 49.2
Subject 492 38 425
Annot | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:26822506-26824181 FORWARD LENGTH=492
NR ref|NP_001105810.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 32 443 e-174 93.9 78.6 83.7
Subject 416 1 416
Annot glycosyltransferase [Zea mays] gi|63087740|emb|CAI93185.1| glycosyltransferase [Zea mays]
IRGSP Os04t0650366-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 32 286 5e-98 102 46.5 50.8
Subject 452 1 255
Annot
Sbicolor Sobic.006G242100.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 32 443 e-164 102.5 77.2 82.4
Subject 454 1 419
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00023.1.g04860.1.am.mk length: 443 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 1.2e-40 153-441
HMMPfam PF03360 Glyco_transf_43 1.2e-30 221-432
no_ID  
Gene3D G3DSA:3.90.550.10 no description 5.8e-48 200-441
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 1.2e-40 153-441
Seg seg seg NA 118-140
198-210
superfamily SSF53448 Nucleotide-diphospho-sugar 1.4e-52 199-441
Pseudomolecule
Chromosome Start End Strand
1199230669924519-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00023.1 maker_non_over exon 2080668 2081169 . - . ID=Zjn_sc00023.1.g04860.1.am.mk:exon:2
Zjn_sc00023.1 maker_non_over exon 2081292 2082121 . - . ID=Zjn_sc00023.1.g04860.1.am.mk:exon:1

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