Z. japonica Nagirizaki
Zjn_sc00023.1.g04320.1.sm.mk ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G74500.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 103 25 102 5e-19 90.3 47.6 61.2
Subject 93 17 91
Annot | Symbols: ATBS1, TMO7, BS1 | activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 | chr1:27998298-27998668 REVERSE LENGTH=93
NR ref|XP_002448623.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 103 12 103 3e-31 101 77.7 82.5
Subject 104 14 104
Annot hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor] gi|241939806|gb|EES12951.1| hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor]
IRGSP Os04t0641700-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 103 27 103 7e-33 101 67 72.8
Subject 104 29 104
Annot
Sbicolor Sobic.006G236600.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 103 12 103 2e-34 101 77.7 82.5
Subject 104 14 104
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00023.1.g04320.1.sm.mk length: 103 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2e-07 28-74
ProfileScan PS50888 BHLH 9.470 14-70
superfamily SSF47459 HLH, 1.2e-06 28-76
no_ID  
Coil coil coiled-coil NA 67-88
Seg seg seg NA 14-26
76-88
Pseudomolecule
Chromosome Start End Strand
1197210389721447-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00023.1 maker_non_over exon 1878640 1878792 . - . ID=Zjn_sc00023.1.g04320.1.sm.mk:exon:2
Zjn_sc00023.1 maker_non_over exon 1878891 1879049 . - . ID=Zjn_sc00023.1.g04320.1.sm.mk:exon:1

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