Z. japonica Nagirizaki
Zjn_sc00023.1.g00840.1.cf.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G16530.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 254 2 253 4e-79 134.6 55.9 71.7
Subject 342 89 341
Annot | Symbols: | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr2:7163276-7165064 REVERSE LENGTH=342
NR ref|XP_008663467.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 254 1 254 e-124 141.3 84.3 91.7
Subject 359 105 359
Annot PREDICTED: polyprenol reductase 1 isoform X1 [Zea mays] gi|413919202|gb|AFW59134.1| hypothetical protein ZEAMMB73_122101 [Zea mays]
IRGSP Os04t0576800-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 254 1 254 e-125 125.2 83.9 90.2
Subject 318 66 318
Annot
Sbicolor Sobic.006G186800.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 254 1 254 e-127 138.2 84.3 92.5
Subject 351 97 351
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00023.1.g00840.1.cf.mkhc length: 254 aa.
IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006629 lipid metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
HMMPfam PF02544 Steroid_dh 7.5e-28 142-253
ProfileScan PS50244 S5A_REDUCTASE 20.422 146-229
no_ID  
HMMPanther PTHR14624 DFG10 2.3e-80 41-254
Seg seg seg NA 21-34
Pseudomolecule
Chromosome Start End Strand
1182077808211388+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00023.1 maker exon 365382 365500 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:1
Zjn_sc00023.1 maker exon 366000 366352 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:2
Zjn_sc00023.1 maker exon 366438 366672 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:3
Zjn_sc00023.1 maker exon 367208 367303 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:4
Zjn_sc00023.1 maker exon 368216 368287 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:5
Zjn_sc00023.1 maker exon 368400 368990 . + . ID=Zjn_sc00023.1.g00840.1.cf.mkhc:exon:6

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