Z. japonica Nagirizaki
Zjn_sc00022.1.g08150.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G53420.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 258 e-120 71.9 54.6 56.6
Subject 287 1 254
Annot | Symbols: PIP2A, PIP2, PIP2;1 | plasma membrane intrinsic protein 2A | chr3:19803906-19805454 REVERSE LENGTH=287
NR ref|XP_002452483.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 258 e-137 72.4 61.4 63.2
Subject 289 1 258
Annot hypothetical protein SORBIDRAFT_04g026650 [Sorghum bicolor] gi|241932314|gb|EES05459.1| hypothetical protein SORBIDRAFT_04g026650 [Sorghum bicolor]
IRGSP Os02t0629200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 258 e-135 72.2 58.4 60.7
Subject 288 1 258
Annot
Sbicolor Sobic.004G222000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 258 e-140 72.4 61.4 63.2
Subject 289 1 258
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g08150.1.am.mkhc length: 399 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.3e-59 41-60
91-115
128-147
177-195
213-235
HMMPanther PTHR19139 AQUAPORIN 5.3e-181 10-252
HMMPfam PF00230 MIP 5.5e-76 33-253
HMMTigr TIGR00861 MIP: 1.2e-55 45-245
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 109-117
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.4e-79 14-251
superfamily SSF81338 Aquaporin-like 9.6e-51 30-243
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 5.3e-181 10-252
Seg seg seg NA 263-275
Pseudomolecule
Chromosome Start End Strand
81599384215997392+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker exon 3432429 3432609 . - . ID=Zjn_sc00022.1.g08150.1.am.mkhc:exon:5
Zjn_sc00022.1 maker exon 3433051 3433309 . - . ID=Zjn_sc00022.1.g08150.1.am.mkhc:exon:4
Zjn_sc00022.1 maker exon 3434031 3434175 . - . ID=Zjn_sc00022.1.g08150.1.am.mkhc:exon:3
Zjn_sc00022.1 maker exon 3435195 3435490 . - . ID=Zjn_sc00022.1.g08150.1.am.mkhc:exon:2
Zjn_sc00022.1 maker exon 3435580 3435979 . - . ID=Zjn_sc00022.1.g08150.1.am.mkhc:exon:1

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