Z. japonica Nagirizaki
Zjn_sc00022.1.g06640.1.am.mk ( /TE )
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G44940.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 112 251 5e-39 81.7 24.4 26.9
Subject 295 89 258
Annot | Symbols: | Integrase-type DNA-binding superfamily protein | chr2:18537294-18538181 FORWARD LENGTH=295
NR ref|XP_004953340.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 38 285 3e-59 75.9 48.8 52.1
Subject 274 1 259
Annot PREDICTED: ethylene-responsive transcription factor ERF038-like [Setaria italica]
IRGSP Os02t0656600-00_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 38 211 2e-46 79.5 35.5 38
Subject 287 1 188
Annot
Sbicolor Sobic.004G295700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 361 38 285 1e-46 78.7 48.5 52.9
Subject 284 1 270
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g06640.1.am.mk length: 361 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 9.7e-10 123-134
145-161
Gene3D G3DSA:3.30.730.10 no description 1.8e-30 122-180
HMMPfam PF00847 AP2 8.4e-16 121-171
HMMSmart SM00380 DNA-binding 3.1e-36 122-185
ProfileScan PS51032 AP2_ERF 23.512 122-179
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 2.1e-22 121-182
no_ID  
HMMPanther PTHR31985 FAMILY 3.9e-78 98-286
Seg seg seg NA 50-57
124-136
198-207
213-234
242-252
Pseudomolecule
Chromosome Start End Strand
81663402816637096+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker_non_over exon 2792725 2792825 . - . ID=Zjn_sc00022.1.g06640.1.am.mk:exon:3
Zjn_sc00022.1 maker_non_over exon 2794698 2794836 . - . ID=Zjn_sc00022.1.g06640.1.am.mk:exon:2
Zjn_sc00022.1 maker_non_over exon 2794948 2795793 . - . ID=Zjn_sc00022.1.g06640.1.am.mk:exon:1

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