Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00022.1.g06560.1.am.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00022.1)

BLAST

TAIR10	AT3G57560.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	349	34	349	e-112	99.4	58.2	74.5
		Subject	347	38	347
		Annot	\| Symbols: NAGK \| N-acetyl-l-glutamate kinase \| chr3:21311164-21312207 REVERSE LENGTH=347
NR	ref\|XP_002454536.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	349	1	349	e-160	98.9	87.1	90.8
		Subject	345	1	345
		Annot	hypothetical protein SORBIDRAFT_04g032930 [Sorghum bicolor] gi\|241934367\|gb\|EES07512.1\| hypothetical protein SORBIDRAFT_04g032930 [Sorghum bicolor]
IRGSP	Os04t0550500-05_chr04_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	349	1	349	e-147	98.3	79.4	89.4
		Subject	343	1	343
		Annot
Sbicolor	Sobic.004G295400.1.p\|Chr04\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	349	1	349	e-163	98.9	87.1	90.8
		Subject	345	1	345
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR001048	Aspartate/glutamate/uridylate kinase
Zjn_sc00022.1.g06560.1.am.mk				length: 349 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0008652	cellular amino acid biosynthetic process
Gene3D	G3DSA:3.40.1160.10	no description	2.2e-97	86-348
HMMPfam	PF00696	AA_kinase	1.1e-39	88-324
superfamily	SSF53633	Carbamate	5.3e-82	62-349
IPR001057	Glutamate/acetylglutamate kinase
Molecular Function	GO:0004349	glutamate 5-kinase activity
Biological Process	GO:0006561	proline biosynthetic process
FPrintScan	PR00474	GLU5KINASE	7.1e-07	119-133 246-273 299-319
IPR004662	Acetylglutamate kinase
Molecular Function	GO:0003991	acetylglutamate kinase activity
Cellular Component	GO:0005737	cytoplasm
Biological Process	GO:0006526	arginine biosynthetic process
HMMPIR	PIRSF000728	N-acetylglutamate	3.6e-143	65-349
HMMTigr	TIGR00761	argB:	6.7e-80	89-324
no_ID
HMMPanther	PTHR31567	FAMILY	4.9e-133	55-348
Seg	seg	seg	NA	32-46 54-75 247-261

Pseudomolecule

Chromosome	Start	End	Strand
8	16672411	16673460	+

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00022.1	maker_non_over	exon	2756361	2757410	.	-	.	ID=Zjn_sc00022.1.g06560.1.am.mk:exon:1