Z. japonica Nagirizaki
Zjn_sc00022.1.g03190.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G12120.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 387 e-158 99 68.5 80.1
Subject 383 1 383
Annot | Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383
NR ref|XP_004953689.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 387 0.0 100 92 96.4
Subject 387 1 387
Annot PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 [Setaria italica]
IRGSP Os02t0716500-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 387 0.0 100.3 87.6 94.3
Subject 388 1 388
Annot
Sbicolor Sobic.004G260800.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 387 1 387 0.0 100 89.4 95.6
Subject 387 1 387
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g03190.1.sm.mk length: 387 aa.
IPR005804 Fatty acid desaturase, type 1
method AccNumber shortName E-value location
Biological Process GO:0006629 lipid metabolic process    
HMMPfam PF00487 FA_desaturase 7.6e-32 90-350
IPR021863 Protein of unknown function DUF3474
Molecular Function GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF11960 DUF3474 5.7e-11 30-72
no_ID  
HMMPanther PTHR32100 FAMILY 0 1-387
HMMPanther PTHR32100:SF7 SUBFAMILY 0 1-387
Seg seg seg NA 244-255
Pseudomolecule
Chromosome Start End Strand
81806493118066094-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker_non_over exon 1363727 1364890 . + . ID=Zjn_sc00022.1.g03190.1.sm.mk:exon:1

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