Z. japonica Nagirizaki
Zjn_sc00022.1.g02090.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G17810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 39 201 9e-66 130.7 37.4 41.4
Subject 426 22 184
Annot | Symbols: PYD1 | pyrimidine 1 | chr3:6094279-6096289 FORWARD LENGTH=426
NR ref|NP_001142101.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 29 201 9e-81 127.3 47.5 50.3
Subject 415 1 173
Annot uncharacterized protein LOC100274265 [Zea mays] gi|194707116|gb|ACF87642.1| unknown [Zea mays] gi|223947605|gb|ACN27886.1| unknown [Zea mays] gi|413938758|gb|AFW73309.1| hypothetical protein ZEAMMB73_476987 [Zea mays]
IRGSP Os02t0736400-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 29 201 2e-83 127 47.2 49.7
Subject 414 1 172
Annot
Sbicolor Sobic.004G246200.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 29 201 2e-82 128.8 47.5 50.3
Subject 420 1 178
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g02090.1.am.mkhc length: 326 aa.
IPR012135 Dihydroorotate dehydrogenase, class 1/ 2
method AccNumber shortName E-value location
Molecular Function GO:0004152 dihydroorotate dehydrogenase activity    
Biological Process GO:0006222 UMP biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01180 DHO_dh 3.7e-08 213-262
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 9.9e-20 69-199
208-278
no_ID  
HMMPanther PTHR11938 FAD 1.8e-155 66-326
HMMPanther PTHR11938:SF13 DIHYDROOROTATE 1.8e-155 66-326
Seg seg seg NA 43-53
superfamily SSF51395 FMN-linked 1.6e-24 63-275
Pseudomolecule
Chromosome Start End Strand
81850851618512204-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker exon 917617 917949 . + . ID=Zjn_sc00022.1.g02090.1.am.mkhc:exon:1
Zjn_sc00022.1 maker exon 918702 918965 . + . ID=Zjn_sc00022.1.g02090.1.am.mkhc:exon:2
Zjn_sc00022.1 maker exon 919586 919702 . + . ID=Zjn_sc00022.1.g02090.1.am.mkhc:exon:3
Zjn_sc00022.1 maker exon 919880 919989 . + . ID=Zjn_sc00022.1.g02090.1.am.mkhc:exon:4
Zjn_sc00022.1 maker exon 920729 921305 . + . ID=Zjn_sc00022.1.g02090.1.am.mkhc:exon:5

Top