Z. japonica Nagirizaki
Zjn_sc00022.1.g01430.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G74470.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 135 570 0.0 81.9 58.6 66.7
Subject 467 35 467
Annot | Symbols: | Pyridine nucleotide-disulphide oxidoreductase family protein | chr1:27991248-27992845 FORWARD LENGTH=467
NR ref|NP_001149382.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 114 570 0.0 80.2 77.4 78.9
Subject 457 1 457
Annot LOC100283007 [Zea mays] gi|195626836|gb|ACG35248.1| geranylgeranyl hydrogenase [Zea mays] gi|223975327|gb|ACN31851.1| unknown [Zea mays] gi|413938849|gb|AFW73400.1| geranylgeranyl hydrogenase [Zea mays]
IRGSP Os02t0744900-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 123 570 0.0 81.2 73.2 75.4
Subject 463 17 463
Annot
Sbicolor Sobic.004G238500.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 114 570 0.0 80.2 77.4 79.1
Subject 457 1 457
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g01430.1.am.mk length: 570 aa.
IPR003042 Aromatic-ring hydroxylase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00420 RNGMNOXGNASE 7.2e-12 159-181
307-322
428-443
IPR010253 Geranylgeranyl reductase, plant/prokaryotic
Biological Process GO:0015979 photosynthesis    
Biological Process GO:0015995 chlorophyll biosynthetic process    
Molecular Function GO:0045550 geranylgeranyl reductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR02023 BchP-ChlP: 1.1e-170 159-557
IPR011774 Geranylgeranyl reductase, plant/cyanobacteria
Molecular Function GO:0045550 geranylgeranyl reductase activity    
Biological Process GO:0051188 cofactor biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR02028 ChlP: 4.7e-221 158-557
IPR011777 Geranylgeranyl reductase family
Molecular Function GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR02032 GG-red-SF: 1.1e-57 160-463
IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07992 Pyr_redox_2 4.7e-07 159-322
no_ID  
Gene3D G3DSA:3.30.9.10 no description 3.9e-34 321-470
Gene3D G3DSA:3.50.50.60 no description 2.5e-12 244-320
HMMPanther PTHR10617 ELECTRON 1.1e-289 110-570
HMMPanther PTHR10617:SF9 GERANYLGERANYL 1.1e-289 110-570
Seg seg seg NA 24-37
115-148
160-181
superfamily SSF51905 FAD/NAD(P)-binding 1.1e-37 156-548
Pseudomolecule
Chromosome Start End Strand
81886173518864248+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker_non_over exon 565573 566008 . - . ID=Zjn_sc00022.1.g01430.1.am.mk:exon:4
Zjn_sc00022.1 maker_non_over exon 566105 566560 . - . ID=Zjn_sc00022.1.g01430.1.am.mk:exon:3
Zjn_sc00022.1 maker_non_over exon 566864 567546 . - . ID=Zjn_sc00022.1.g01430.1.am.mk:exon:2
Zjn_sc00022.1 maker_non_over exon 567949 568086 . - . ID=Zjn_sc00022.1.g01430.1.am.mk:exon:1

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