Z. japonica Nagirizaki
Zjn_sc00022.1.g00450.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G65420.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 382 168 337 2e-38 83.2 22.5 31.9
Subject 318 42 231
Annot | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-26143750 REVERSE LENGTH=318
NR ref|XP_002454584.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 382 109 340 4e-92 93.7 45.3 52.4
Subject 358 1 247
Annot hypothetical protein SORBIDRAFT_04g033870 [Sorghum bicolor] gi|241934415|gb|EES07560.1| hypothetical protein SORBIDRAFT_04g033870 [Sorghum bicolor]
IRGSP Os09t0466100-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 382 110 337 9e-50 93.2 31.7 39.8
Subject 356 4 246
Annot
Sbicolor Sobic.004G305700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 382 109 340 4e-95 93.7 45.3 52.4
Subject 358 1 247
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g00450.1.am.mkhc length: 382 aa.
IPR006671 Cyclin, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00134 Cyclin_N 2.8e-15 236-294
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 4.1e-14 236-295
superfamily SSF47954 Cyclin-like 9.8e-20 167-295
no_ID  
HMMPanther PTHR10177 CYCLINE 8.2e-49 164-337
HMMPanther PTHR10177:SF76 CYCLIN-D 8.2e-49 164-337
Seg seg seg NA 49-64
150-160
Pseudomolecule
Chromosome Start End Strand
81924640419253571-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker exon 176250 176329 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:1
Zjn_sc00022.1 maker exon 177048 177152 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:2
Zjn_sc00022.1 maker exon 177552 177676 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:3
Zjn_sc00022.1 maker exon 178494 178622 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:4
Zjn_sc00022.1 maker exon 179574 179644 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:5
Zjn_sc00022.1 maker exon 180723 180898 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:6
Zjn_sc00022.1 maker exon 181145 181532 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:7
Zjn_sc00022.1 maker exon 181864 181962 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:8
Zjn_sc00022.1 maker exon 182052 182253 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:9
Zjn_sc00022.1 maker exon 182692 183417 . + . ID=Zjn_sc00022.1.g00450.1.am.mkhc:exon:10

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