Z. japonica Nagirizaki
Zjn_sc00022.1.g00110.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G49720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 137 454 9e-69 86.3 38.1 46.3
Subject 392 22 392
Annot | Symbols: ABF1 | abscisic acid responsive element-binding factor 1 | chr1:18400826-18402354 FORWARD LENGTH=392
NR ref|XP_004954029.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 118 454 e-128 78 59.7 62.8
Subject 354 8 354
Annot PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Setaria italica]
IRGSP Os02t0766700-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 127 454 e-120 78.6 54.4 58.4
Subject 357 10 357
Annot
Sbicolor Sobic.004G309600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 118 454 e-130 76.2 58.6 63.2
Subject 346 8 346
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00022.1.g00110.1.am.mkhc length: 454 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 1.2e-11 372-425
HMMSmart SM00338 basic 8.3e-13 370-435
PatternScan PS00036 BZIP_BASIC NA 377-392
ProfileScan PS50217 BZIP 10.990 372-417
no_ID  
Coil coil coiled-coil NA 390-433
Gene3D G3DSA:1.20.5.170 no description 5.9e-14 366-432
HMMPanther PTHR22952 CAMP-RESPONSE 1.6e-171 108-450
HMMPanther PTHR22952:SF54 BZIP 1.6e-171 108-450
Seg seg seg NA 92-106
121-132
183-202
272-292
303-320
342-351
Pseudomolecule
Chromosome Start End Strand
81938862719392666-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00022.1 maker exon 37155 37504 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:1
Zjn_sc00022.1 maker exon 37574 38405 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:2
Zjn_sc00022.1 maker exon 38757 38828 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:3
Zjn_sc00022.1 maker exon 39491 39520 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:4
Zjn_sc00022.1 maker exon 40455 40652 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:5
Zjn_sc00022.1 maker exon 40910 41194 . + . ID=Zjn_sc00022.1.g00110.1.am.mkhc:exon:6

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