Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00020.1.g06400.1.sm.mk

Sequence

	Init: Term: reverse complement

BLAST

TAIR10	AT2G38940.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	533	1	515	0.0	100.2	74.7	83.9
		Subject	534	1	516
		Annot	\| Symbols: ATPT2, PHT1;4 \| phosphate transporter 1;4 \| chr2:16258500-16260104 FORWARD LENGTH=534
NR	ref\|XP_002464558.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	533	1	531	0.0	101.5	91.4	95.1
		Subject	541	1	537
		Annot	hypothetical protein SORBIDRAFT_01g020570 [Sorghum bicolor] gi\|241918412\|gb\|EER91556.1\| hypothetical protein SORBIDRAFT_01g020570 [Sorghum bicolor]
IRGSP	Os10t0444700-02_chr10_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	533	6	532	0.0	101.5	89.5	94.6
		Subject	541	8	541
		Annot
Sbicolor	Sobic.001G234800.1.p\|Chr01\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	533	1	531	0.0	101.5	91.4	95.1
		Subject	541	1	537
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR004738	Phosphate permease
Zjn_sc00020.1.g06400.1.sm.mk				length: 533 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005315	inorganic phosphate transmembrane transporter activity
Biological Process	GO:0006817	phosphate ion transport
Cellular Component	GO:0016021	integral to membrane
HMMTigr	TIGR00887	2A0109:	2.3e-223	13-516
IPR005828	General substrate transporter
Cellular Component	GO:0016021	integral to membrane
Molecular Function	GO:0022857	transmembrane transporter activity
Biological Process	GO:0055085	transmembrane transport
HMMPfam	PF00083	Sugar_tr	3.2e-45	28-514
IPR016196	Major facilitator superfamily domain, general substrate transporter
superfamily	SSF103473	MFS	5.2e-60	1-521
IPR020846	Major facilitator superfamily domain
ProfileScan	PS50850	MFS	31.008	26-507
no_ID
Gene3D	G3DSA:1.20.1250.20	no description	8.9e-12	27-239 352-515
HMMPanther	PTHR24064	FAMILY	3.3e-243	6-524
HMMPanther	PTHR24064:SF0	SUBFAMILY	3.3e-243	6-524
Seg	seg	seg	NA	70-79 246-257 444-461 511-526

Pseudomolecule

Chromosome	Start	End	Strand
7	10754225	10755826	-

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00020.1	maker_non_over	exon	3309721	3311322	.	+	.	ID=Zjn_sc00020.1.g06400.1.sm.mk:exon:1