Z. japonica Nagirizaki
Zjn_sc00020.1.g06290.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G02260.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 504 1 501 0.0 99.6 65.7 77.2
Subject 502 1 501
Annot | Symbols: | Divalent ion symporter | chr1:440757-442459 REVERSE LENGTH=502
NR ref|XP_004982984.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 504 1 504 0.0 111.1 91.1 94.8
Subject 560 1 560
Annot PREDICTED: putative transporter arsB [Setaria italica] gi|514816488|ref|XP_004982985.1| PREDICTED: putative transporter arsB [Setaria italica]
IRGSP Os03t0147400-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 504 1 504 0.0 110.5 74 83.3
Subject 557 1 557
Annot
Sbicolor Sobic.001G504000.4.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 504 1 504 0.0 110.3 80.8 89.9
Subject 556 1 556
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g06290.1.am.mk length: 504 aa.
IPR000802 Arsenite/antimonite efflux pump membrane protein, ArsB
method AccNumber shortName E-value location
Molecular Function GO:0015105 arsenite transmembrane transporter activity    
Biological Process GO:0015700 arsenite transport    
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR00758 ARSENICPUMP 6.6e-05 109-133
299-323
IPR004680 Citrate transporter-like domain
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03600 CitMHS 1.6e-104 16-450
no_ID  
HMMPanther PTHR10283 SOLUTE 5.8e-296 13-504
HMMPanther PTHR10283:SF40 ARSENITE 5.8e-296 13-504
Seg seg seg NA 286-299
424-438
Pseudomolecule
Chromosome Start End Strand
71081402310815949+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker_non_over exon 3249598 3249866 . - . ID=Zjn_sc00020.1.g06290.1.am.mk:exon:4
Zjn_sc00020.1 maker_non_over exon 3249961 3250150 . - . ID=Zjn_sc00020.1.g06290.1.am.mk:exon:3
Zjn_sc00020.1 maker_non_over exon 3250292 3250733 . - . ID=Zjn_sc00020.1.g06290.1.am.mk:exon:2
Zjn_sc00020.1 maker_non_over exon 3250911 3251524 . - . ID=Zjn_sc00020.1.g06290.1.am.mk:exon:1

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