Z. japonica Nagirizaki
Zjn_sc00020.1.g05870.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G25180.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 118 1 116 3e-13 505.1 37.3 52.5
Subject 596 105 218
Annot | Symbols: ARR12, RR12 | response regulator 12 | chr2:10724490-10726961 REVERSE LENGTH=596
NR ref|XP_004982951.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 118 1 116 2e-32 281.4 58.5 70.3
Subject 332 98 202
Annot PREDICTED: two-component response regulator EHD1-like [Setaria italica]
IRGSP Os10t0463400-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 118 1 116 3e-27 289 54.2 73.7
Subject 341 99 221
Annot
Sbicolor Sobic.001G227900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 118 1 114 9e-34 294.1 66.9 75.4
Subject 347 98 216
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g05870.1.am.mk length: 118 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
ProfileScan PS50110 RESPONSE_REGULATORY 9.384 1-29
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 6e-05 92-116
no_ID  
Coil coil coiled-coil NA 71-92
Gene3D G3DSA:3.40.50.2300 no description 6.3e-07 2-49
HMMPanther PTHR26402 RESPONSE 2e-13 1-111
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 2e-13 1-111
Pseudomolecule
Chromosome Start End Strand
71110533111105687-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker_non_over exon 2959860 2960216 . + . ID=Zjn_sc00020.1.g05870.1.am.mk:exon:1

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