Z. japonica Nagirizaki
Zjn_sc00020.1.g05820.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G16110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 189 29 182 2e-29 351.3 39.2 48.1
Subject 664 105 265
Annot | Symbols: ARR2, RR2 | response regulator 2 | chr4:9112979-9115785 FORWARD LENGTH=664
NR ref|XP_004982951.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 189 1 182 4e-52 175.7 62.4 76.2
Subject 332 1 228
Annot PREDICTED: two-component response regulator EHD1-like [Setaria italica]
IRGSP Os10t0463400-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 189 1 182 2e-40 180.4 51.3 68.3
Subject 341 1 247
Annot
Sbicolor Sobic.001G227900.2.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 189 1 182 4e-61 156.6 69.3 81.5
Subject 296 1 192
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g05820.1.sm.mk length: 189 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 5.5e-09 135-182
IPR006447 Myb domain, plants
HMMTigr TIGR01557 myb_SHAQKYF: 1.8e-20 133-183
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.4e-20 132-182
superfamily SSF46689 Homeodomain-like 4.7e-13 129-182
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 1.7e-10 8-139
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 1.5e-06 8-38
39-85
HMMPanther PTHR26402 RESPONSE 2.5e-13 38-151
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 2.5e-13 38-151
Seg seg seg NA 107-117
Pseudomolecule
Chromosome Start End Strand
71113221611140258-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker_non_over exon 2925289 2925397 . + . ID=Zjn_sc00020.1.g05820.1.sm.mk:exon:1
Zjn_sc00020.1 maker_non_over exon 2928039 2928398 . + . ID=Zjn_sc00020.1.g05820.1.sm.mk:exon:2
Zjn_sc00020.1 maker_non_over exon 2928589 2928665 . + . ID=Zjn_sc00020.1.g05820.1.sm.mk:exon:3
Zjn_sc00020.1 maker_non_over exon 2933308 2933331 . + . ID=Zjn_sc00020.1.g05820.1.sm.mk:exon:4

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