Z. japonica Nagirizaki
Zjn_sc00020.1.g04150.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT3G59890.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
268 |
66 |
268 |
5e-76 |
130.2 |
48.9 |
62.7 |
| Subject |
349 |
71 |
298 |
|
| Annot |
| Symbols: | Dihydrodipicolinate reductase, bacterial/plant | chr3:22124497-22126491 REVERSE LENGTH=349 |
| NR |
ref|NP_001132572.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
268 |
1 |
268 |
e-117 |
128 |
79.9 |
88.4 |
| Subject |
343 |
1 |
292 |
|
| Annot |
uncharacterized protein LOC100194039 [Zea mays] gi|195625232|gb|ACG34446.1| dihydrodipicolinate reductase [Zea mays] |
| IRGSP |
Os02t0436400-01_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
268 |
1 |
268 |
e-115 |
128 |
78.7 |
85.8 |
| Subject |
343 |
1 |
292 |
|
| Annot |
|
| Sbicolor |
Sobic.007G171200.2.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
268 |
1 |
268 |
e-124 |
109 |
82.8 |
89.6 |
| Subject |
292 |
1 |
292 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00020.1.g04150.1.sm.mk |
length: 268 aa. |
| IPR000846 |
Dihydrodipicolinate reductase, N-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
|
|
| Biological Process |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF01113 |
DapB_N |
2.9e-13 |
71-194 |
| IPR011770 |
Dihydrodipicolinate reductase, bacterial/plant |
| Molecular Function |
GO:0008839 |
4-hydroxy-tetrahydrodipicolinate reductase |
|
|
| Biological Process |
GO:0009089 |
lysine biosynthetic process via diaminopimelate |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| Molecular Function |
GO:0070402 |
NADPH binding |
|
|
| HMMPanther |
PTHR20836 |
DIHYDRODIPICOLINATE |
3.5e-44 |
54-259 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
2.5e-21 |
70-199 |
| no_ID |
|
| HMMPanther |
PTHR20836:SF0 |
SUBFAMILY |
3.5e-44 |
54-259 |
| Seg |
seg |
seg |
NA |
35-46 |
| superfamily |
SSF51735 |
NAD(P)-binding |
3.9e-11 |
70-190 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 7 | 12098528 | 12102210 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00020.1 |
maker_non_over |
exon |
1963337 |
1963555 |
. |
+ |
. |
ID=Zjn_sc00020.1.g04150.1.sm.mk:exon:1 |
| Zjn_sc00020.1 |
maker_non_over |
exon |
1964241 |
1964478 |
. |
+ |
. |
ID=Zjn_sc00020.1.g04150.1.sm.mk:exon:2 |
| Zjn_sc00020.1 |
maker_non_over |
exon |
1964938 |
1965071 |
. |
+ |
. |
ID=Zjn_sc00020.1.g04150.1.sm.mk:exon:3 |
| Zjn_sc00020.1 |
maker_non_over |
exon |
1966261 |
1966362 |
. |
+ |
. |
ID=Zjn_sc00020.1.g04150.1.sm.mk:exon:4 |
| Zjn_sc00020.1 |
maker_non_over |
exon |
1966906 |
1967019 |
. |
+ |
. |
ID=Zjn_sc00020.1.g04150.1.sm.mk:exon:5 |