Z. japonica Nagirizaki
Zjn_sc00020.1.g01870.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G27550.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 173 6 173 2e-73 101.2 72.3 85
Subject 175 7 175
Annot | Symbols: ATC | centroradialis | chr2:11773417-11774509 FORWARD LENGTH=175
NR ref|XP_004952639.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 173 1 173 5e-89 100 91.9 96.5
Subject 173 1 173
Annot PREDICTED: protein SELF-PRUNING [Setaria italica]
IRGSP Os02t0531600-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 173 1 173 1e-90 100 90.8 95.4
Subject 173 1 173
Annot
Sbicolor Sobic.004G165100.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 173 1 173 9e-92 100 90.8 97.7
Subject 173 1 173
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g01870.1.am.mk length: 173 aa.
IPR001858 Phosphatidylethanolamine-binding, conserved site
method AccNumber shortName E-value location
PatternScan PS01220 PBP NA 65-87
IPR008914 Phosphatidylethanolamine-binding protein PEBP
Gene3D G3DSA:3.90.280.10 no description 7.6e-61 2-169
HMMPfam PF01161 PBP 1.2e-21 26-162
superfamily SSF49777 PEBP-like 2.5e-55 11-168
no_ID  
HMMPanther PTHR11362 PHOSPHATIDYLETHANOLAMINE-BINDING 8.9e-70 3-173
Pseudomolecule
Chromosome Start End Strand
71322450513225556-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker_non_over exon 839991 840191 . + . ID=Zjn_sc00020.1.g01870.1.am.mk:exon:1
Zjn_sc00020.1 maker_non_over exon 840308 840369 . + . ID=Zjn_sc00020.1.g01870.1.am.mk:exon:2
Zjn_sc00020.1 maker_non_over exon 840601 840641 . + . ID=Zjn_sc00020.1.g01870.1.am.mk:exon:3
Zjn_sc00020.1 maker_non_over exon 840825 841042 . + . ID=Zjn_sc00020.1.g01870.1.am.mk:exon:4

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