Z. japonica Nagirizaki
Zjn_sc00020.1.g01590.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G36010.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 65 148 7e-23 245.9 25.4 32.1
Subject 514 289 394
Annot | Symbols: E2F3, ATE2FA | E2F transcription factor 3 | chr2:15119688-15122893 FORWARD LENGTH=514
NR dbj|BAB20932.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 73 168 6e-32 208.6 37.3 38.3
Subject 436 193 327
Annot E2F homolog [Oryza sativa] gi|50251979|dbj|BAD27913.1| E2F homolog [Oryza sativa Japonica Group]
IRGSP Os02t0537500-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 73 168 8e-35 227.3 37.3 38.3
Subject 475 232 366
Annot
Sbicolor Sobic.004G168300.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 73 209 1e-33 217.7 46.4 52.2
Subject 455 227 455
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g01590.1.sm.mkhc length: 209 aa.
IPR015633 E2F Family
method AccNumber shortName E-value location
HMMPanther PTHR12081 TRANSCRIPTION 1.1e-21 61-208
no_ID  
HMMPanther PTHR12081:SF18 TRANSCRIPTION 1.1e-21 61-208
Seg seg seg NA 42-55
superfamily SSF144074 E2F-DP 8.9e-10 66-134
Pseudomolecule
Chromosome Start End Strand
71334506113350045-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker exon 715502 715717 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:1
Zjn_sc00020.1 maker exon 717769 717821 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:2
Zjn_sc00020.1 maker exon 718113 718161 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:3
Zjn_sc00020.1 maker exon 718500 718576 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:4
Zjn_sc00020.1 maker exon 718653 718768 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:5
Zjn_sc00020.1 maker exon 719311 720486 . + . ID=Zjn_sc00020.1.g01590.1.sm.mkhc:exon:6

Top