Z. japonica Nagirizaki
Zjn_sc00020.1.g01360.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G21200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 205 596 2e-66 56 21.6 32.1
Subject 443 1 443
Annot | Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443
NR ref|XP_004952693.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 205 576 e-149 50.8 36.2 40.2
Subject 402 1 376
Annot PREDICTED: uncharacterized protein LOC101766818 [Setaria italica] gi|514713180|ref|XP_004952694.1| PREDICTED: uncharacterized protein LOC101766818 [Setaria italica]
IRGSP Os02t0542400-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 205 603 e-136 51.8 35.5 41.1
Subject 410 1 409
Annot
Sbicolor Sobic.004G170700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 205 601 e-146 51.7 37.7 42.5
Subject 409 1 409
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00020.1.g01360.1.am.mk length: 791 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 559-601
HMMPanther PTHR31292 FAMILY 2.3e-133 253-605
HMMPfam PF13837 Myb_DNA-bind_4 8.8e-20 286-411
Seg seg seg NA 68-97
182-191
227-231
264-281
450-469
578-595
725-765
Pseudomolecule
Chromosome Start End Strand
71346174713467420+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00020.1 maker_non_over exon 598127 598161 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:8
Zjn_sc00020.1 maker_non_over exon 599318 599519 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:7
Zjn_sc00020.1 maker_non_over exon 599619 599895 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:6
Zjn_sc00020.1 maker_non_over exon 600294 600372 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:5
Zjn_sc00020.1 maker_non_over exon 601623 602925 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:4
Zjn_sc00020.1 maker_non_over exon 603103 603193 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:3
Zjn_sc00020.1 maker_non_over exon 603332 603434 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:2
Zjn_sc00020.1 maker_non_over exon 603515 603800 . - . ID=Zjn_sc00020.1.g01360.1.am.mk:exon:1

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