Z. japonica Nagirizaki
Zjn_sc00020.1.g00540.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G77810.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
246 |
1 |
246 |
e-127 |
156.1 |
83.3 |
93.1 |
| Subject |
384 |
139 |
384 |
|
| Annot |
| Symbols: | Galactosyltransferase family protein | chr1:29260899-29263001 REVERSE LENGTH=384 |
| NR |
ref|XP_004952712.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
246 |
1 |
246 |
e-144 |
161.8 |
98.4 |
99.6 |
| Subject |
398 |
153 |
398 |
|
| Annot |
PREDICTED: beta-1,3-galactosyltransferase 7-like [Setaria italica] |
| IRGSP |
Os02t0566800-01_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
246 |
1 |
246 |
e-145 |
158.1 |
96.7 |
98.8 |
| Subject |
389 |
144 |
389 |
|
| Annot |
|
| Sbicolor |
Sobic.004G185900.1.p|Chr04|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
246 |
1 |
246 |
e-145 |
210.6 |
97.6 |
99.6 |
| Subject |
518 |
273 |
518 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00020.1.g00540.1.sm.mkhc |
length: 246 aa. |
| IPR002659 |
Glycosyl transferase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[1-238] |
1.3e-187 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
1.4e-43 |
11-187 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF66 |
SUBFAMILY |
1.3e-187 |
1-238 |
| Seg |
seg |
seg |
NA |
3-15 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 7 | 13826736 | 13830269 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00020.1 |
maker |
exon |
235278 |
235425 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:1 |
| Zjn_sc00020.1 |
maker |
exon |
235945 |
236008 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:2 |
| Zjn_sc00020.1 |
maker |
exon |
236920 |
236992 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:3 |
| Zjn_sc00020.1 |
maker |
exon |
237072 |
237192 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:4 |
| Zjn_sc00020.1 |
maker |
exon |
237289 |
237376 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:5 |
| Zjn_sc00020.1 |
maker |
exon |
237468 |
237593 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:6 |
| Zjn_sc00020.1 |
maker |
exon |
237673 |
237782 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:7 |
| Zjn_sc00020.1 |
maker |
exon |
237863 |
238811 |
. |
+ |
. |
ID=Zjn_sc00020.1.g00540.1.sm.mkhc:exon:8 |