Z. japonica Nagirizaki
Zjn_sc00019.1.g03150.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G46180.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 364 37 345 e-140 130.5 62.9 75.3
Subject 475 43 371
Annot | Symbols: DELTA-OAT | ornithine-delta-aminotransferase | chr5:18718766-18721271 REVERSE LENGTH=475
NR gb|EEC75822.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 364 1 317 e-167 128 77.7 83.2
Subject 466 1 315
Annot hypothetical protein OsI_12787 [Oryza sativa Indica Group]
IRGSP Os03t0643300-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 364 1 317 e-167 129.9 77.5 82.7
Subject 473 1 322
Annot
Sbicolor Sobic.001G156100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 364 35 317 e-165 128.8 74.5 76.9
Subject 469 35 317
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00019.1.g03150.1.sm.mkhc length: 364 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 4e-187 22-317
HMMPfam PF00202 Aminotran_3 9.1e-85 57-317
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 256-293
IPR010164 Ornithine aminotransferase
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986:SF18 ORNITHINE 4e-187 22-317
HMMTigr TIGR01885 Orn_aminotrans: 1.5e-150 34-317
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.7e-75 89-317
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 9e-16 320-321
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.5e-94 28-343
no_ID  
Seg seg seg NA 2-19
22-34
Pseudomolecule
Chromosome Start End Strand
255180955523889+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00019.1 maker exon 2850434 2850961 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:8
Zjn_sc00019.1 maker exon 2851657 2851754 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:7
Zjn_sc00019.1 maker exon 2853434 2853586 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:6
Zjn_sc00019.1 maker exon 2854179 2854234 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:5
Zjn_sc00019.1 maker exon 2854319 2854478 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:4
Zjn_sc00019.1 maker exon 2854901 2855131 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:3
Zjn_sc00019.1 maker exon 2855312 2855420 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:2
Zjn_sc00019.1 maker exon 2856086 2856228 . - . ID=Zjn_sc00019.1.g03150.1.sm.mkhc:exon:1

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