Z. japonica Nagirizaki
Zjn_sc00019.1.g02080.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G19940.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
171 |
40 |
128 |
1e-29 |
234.5 |
41.5 |
44.4 |
| Subject |
401 |
138 |
266 |
|
| Annot |
| Symbols: | oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding | chr2:8613168-8615649 FORWARD LENGTH=401 |
| NR |
ref|XP_010941856.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
171 |
40 |
171 |
4e-45 |
211.1 |
62.6 |
68.4 |
| Subject |
361 |
141 |
361 |
|
| Annot |
PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic isoform X3 [Elaeis guineensis] gi|743856421|ref|XP_010941857.1| PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic isoform X3 [Elaeis guineensis] |
| IRGSP |
Os03t0617900-01_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
171 |
40 |
128 |
2e-39 |
242.7 |
48.5 |
50.9 |
| Subject |
415 |
152 |
280 |
|
| Annot |
|
| Sbicolor |
Sobic.001G166600.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
171 |
40 |
128 |
2e-39 |
243.3 |
48.5 |
50.9 |
| Subject |
416 |
153 |
281 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00019.1.g02080.1.sm.mkhc |
length: 171 aa. |
| IPR016040 |
NAD(P)-binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
7e-10 |
38-81 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.360.10 |
no description |
3e-13 |
82-129 |
| HMMPanther |
PTHR32338 |
FAMILY |
3.5e-47 |
41-171 |
| HMMPanther |
PTHR32338:SF1 |
SUBFAMILY |
3.5e-47 |
41-171 |
| superfamily |
SSF51735 |
NAD(P)-binding |
6.5e-07 |
36-84 |
| superfamily |
SSF55347 |
Glyceraldehyde-3-phosphate |
3.1e-14 |
77-129 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 6275978 | 6280169 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00019.1 |
maker |
exon |
2094154 |
2094852 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:8 |
| Zjn_sc00019.1 |
maker |
exon |
2095387 |
2095409 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:7 |
| Zjn_sc00019.1 |
maker |
exon |
2095710 |
2095790 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:6 |
| Zjn_sc00019.1 |
maker |
exon |
2095877 |
2095937 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:5 |
| Zjn_sc00019.1 |
maker |
exon |
2096481 |
2096552 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:4 |
| Zjn_sc00019.1 |
maker |
exon |
2096621 |
2096671 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:3 |
| Zjn_sc00019.1 |
maker |
exon |
2097489 |
2097551 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:2 |
| Zjn_sc00019.1 |
maker |
exon |
2098095 |
2098345 |
. |
- |
. |
ID=Zjn_sc00019.1.g02080.1.sm.mkhc:exon:1 |