Z. japonica Nagirizaki
Zjn_sc00019.1.g00220.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G05170.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 17 249 5e-91 127.6 50.5 61.1
Subject 407 8 252
Annot | Symbols: | Galactosyltransferase family protein | chr1:1491460-1493931 REVERSE LENGTH=407
NR ref|XP_004982530.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 1 249 e-122 127 70.5 74.3
Subject 405 1 250
Annot PREDICTED: probable beta-1,3-galactosyltransferase 2 [Setaria italica]
IRGSP Os03t0577500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 1 249 e-123 127.3 66.8 72.4
Subject 406 1 251
Annot
Sbicolor Sobic.001G183600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 1 249 e-125 128.2 69.9 73.7
Subject 409 1 254
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00019.1.g00220.1.sm.mkhc length: 319 aa.
IPR002659 Glycosyl transferase, family 31
method AccNumber shortName E-value location
Biological Process GO:0006486 protein glycosylation    
Molecular Function GO:0008378 galactosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11214 BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[16-317] 1.9e-125  
HMMPfam PF01762 Galactosyl_T 1.3e-26 149-251
IPR025298 Domain of unknown function DUF4094
HMMPfam PF13334 DUF4094 8.1e-32 25-115
no_ID  
Coil coil coiled-coil NA 96-117
HMMPanther PTHR11214:SF5 ELICITOR 1.9e-125 16-317
Seg seg seg NA 8-15
162-177
Pseudomolecule
Chromosome Start End Strand
280931198097881+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00019.1 maker exon 276442 276936 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:9
Zjn_sc00019.1 maker exon 277584 277652 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:8
Zjn_sc00019.1 maker exon 278326 278446 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:7
Zjn_sc00019.1 maker exon 278535 278607 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:6
Zjn_sc00019.1 maker exon 278807 278870 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:5
Zjn_sc00019.1 maker exon 278964 279157 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:4
Zjn_sc00019.1 maker exon 279242 279297 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:3
Zjn_sc00019.1 maker exon 279382 279478 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:2
Zjn_sc00019.1 maker exon 280766 281204 . - . ID=Zjn_sc00019.1.g00220.1.sm.mkhc:exon:1

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