Z. japonica Nagirizaki
Zjn_sc00018.1.g06240.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G60140.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
222 |
41 |
214 |
5e-43 |
387.8 |
39.2 |
56.8 |
| Subject |
861 |
663 |
861 |
|
| Annot |
| Symbols: ATTPS10, TPS10 | trehalose phosphate synthase | chr1:22177246-22180073 REVERSE LENGTH=861 |
| NR |
ref|XP_008667005.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
222 |
41 |
218 |
6e-69 |
389.2 |
59 |
67.6 |
| Subject |
864 |
663 |
864 |
|
| Annot |
PREDICTED: uncharacterized protein LOC100191265 isoform X1 [Zea mays] gi|670371459|ref|XP_008667006.1| PREDICTED: uncharacterized protein LOC100191265 isoform X1 [Zea mays] gi|224029881|gb|ACN34016.1| unknown [Zea mays] gi|414589425|tpg|DAA39996.1| TPA: putative trehalose phosphatase/synthase family protein [Zea mays] |
| IRGSP |
Os08t0414700-01_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
222 |
41 |
215 |
5e-60 |
388.3 |
48.6 |
62.6 |
| Subject |
862 |
661 |
859 |
|
| Annot |
|
| Sbicolor |
Sobic.002G188500.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
222 |
41 |
218 |
1e-71 |
387.8 |
57.2 |
68.5 |
| Subject |
861 |
661 |
861 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00018.1.g06240.1.sm.mkhc |
length: 222 aa. |
| IPR003337 |
Trehalose-phosphatase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005992 |
trehalose biosynthetic process |
|
|
| HMMPfam |
PF02358 |
Trehalose_PPase |
1.7e-17 |
40-112 |
| IPR023214 |
HAD-like domain |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
3.9e-15 |
110-197 |
| superfamily |
SSF56784 |
HAD-like |
7.8e-17 |
47-191 |
| no_ID |
|
| HMMPanther |
PTHR10788 |
TREHALOSE-6-PHOSPHATE |
3.5e-39 |
41-215 |
| HMMPanther |
PTHR10788:SF6 |
TREHALOSE-6-PHOSPHATE |
3.5e-39 |
41-215 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 10000877 | 10007306 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00018.1 |
maker |
exon |
2889839 |
2890738 |
. |
- |
. |
ID=Zjn_sc00018.1.g06240.1.sm.mkhc:exon:4 |
| Zjn_sc00018.1 |
maker |
exon |
2890906 |
2891116 |
. |
- |
. |
ID=Zjn_sc00018.1.g06240.1.sm.mkhc:exon:3 |
| Zjn_sc00018.1 |
maker |
exon |
2892762 |
2892858 |
. |
- |
. |
ID=Zjn_sc00018.1.g06240.1.sm.mkhc:exon:2 |
| Zjn_sc00018.1 |
maker |
exon |
2896244 |
2896268 |
. |
- |
. |
ID=Zjn_sc00018.1.g06240.1.sm.mkhc:exon:1 |