Z. japonica Nagirizaki
Zjn_sc00018.1.g05930.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G10100.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 2 359 e-102 102.5 52.5 67.5
Subject 369 3 321
Annot | Symbols: TPPI | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:3157980-3160275 FORWARD LENGTH=369
NR ref|XP_004956679.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 359 e-146 105.6 78.9 81.4
Subject 380 1 325
Annot PREDICTED: probable trehalose-phosphate phosphatase 7 [Setaria italica]
IRGSP Os09t0369400-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 359 e-133 104.2 73.9 79.4
Subject 375 1 324
Annot
Sbicolor Sobic.002G184600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 359 e-145 105.8 76.9 79.4
Subject 381 1 326
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g05930.1.sm.mkhc length: 360 aa.
IPR003337 Trehalose-phosphatase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF02358 Trehalose_PPase 1.7e-46 121-171
202-359
HMMTigr TIGR00685 T6PP: 8.8e-24 200-359
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 4e-38 311-359
superfamily SSF56784 HAD-like 4.3e-21 116-359
no_ID  
HMMPanther PTHR10788 TREHALOSE-6-PHOSPHATE 2.7e-112 67-359
Seg seg seg NA 11-22
49-64
78-86
223-235
Pseudomolecule
Chromosome Start End Strand
201014032310142237-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker exon 2754908 2755336 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:1
Zjn_sc00018.1 maker exon 2755462 2755731 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:2
Zjn_sc00018.1 maker exon 2755840 2755893 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:3
Zjn_sc00018.1 maker exon 2756045 2756146 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:4
Zjn_sc00018.1 maker exon 2756432 2756579 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:5
Zjn_sc00018.1 maker exon 2756743 2756822 . + . ID=Zjn_sc00018.1.g05930.1.sm.mkhc:exon:6

Top