Z. japonica Nagirizaki
Zjn_sc00018.1.g05620.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G18870.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 210 1 193 2e-52 267.6 55.7 71
Subject 562 301 554
Annot | Symbols: ICS2, ATICS2 | isochorismate synthase 2 | chr1:6515486-6519176 FORWARD LENGTH=562
NR ref|XP_008651187.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 210 1 210 1e-85 267.6 82.9 88.6
Subject 562 292 562
Annot PREDICTED: uncharacterized protein LOC100275708 isoform X2 [Zea mays] gi|414885149|tpg|DAA61163.1| TPA: hypothetical protein ZEAMMB73_944140 [Zea mays]
IRGSP Os09t0361500-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 210 1 59 1e-27 179.5 25.2 26.7
Subject 377 311 369
Annot
Sbicolor Sobic.002G180400.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 210 1 210 5e-89 271 82.4 90.5
Subject 569 299 569
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g05620.1.am.mkhc length: 210 aa.
IPR004561 Isochorismate synthase
method AccNumber shortName E-value location
Molecular Function GO:0008909 isochorismate synthase activity    
Biological Process GO:0009058 biosynthetic process    
HMMPanther PTHR11236:SF3 ISOCHORISMATE 1.4e-63 5-155
IPR005801 ADC synthase
Biological Process GO:0009058 biosynthetic process    
Gene3D G3DSA:3.60.120.10 no description 0.00011 7-154
159-195
superfamily SSF56322 ADC 7.3e-40 5-192
IPR015890 Chorismate binding, C-terminal
HMMPfam PF00425 Chorismate_bind 1.2e-24 6-152
no_ID  
HMMPanther PTHR11236 AMINOBENZOATE/ANTHRANILATE 1.4e-63 5-155
Pseudomolecule
Chromosome Start End Strand
201027950610283091-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker exon 2614054 2614142 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:1
Zjn_sc00018.1 maker exon 2614286 2614403 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:2
Zjn_sc00018.1 maker exon 2614491 2614607 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:3
Zjn_sc00018.1 maker exon 2614677 2614823 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:4
Zjn_sc00018.1 maker exon 2615066 2615140 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:5
Zjn_sc00018.1 maker exon 2615223 2615291 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:6
Zjn_sc00018.1 maker exon 2615422 2615540 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:7
Zjn_sc00018.1 maker exon 2615659 2615716 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:8
Zjn_sc00018.1 maker exon 2615863 2615973 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:9
Zjn_sc00018.1 maker exon 2616566 2616658 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:10
Zjn_sc00018.1 maker exon 2616779 2616864 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:11
Zjn_sc00018.1 maker exon 2617001 2617388 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:12
Zjn_sc00018.1 maker exon 2617467 2617639 . + . ID=Zjn_sc00018.1.g05620.1.am.mkhc:exon:13

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