Z. japonica Nagirizaki
Zjn_sc00018.1.g04660.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G26830.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
477 |
175 |
463 |
e-116 |
78.4 |
40.3 |
49.9 |
| Subject |
374 |
46 |
334 |
|
| Annot |
| Symbols: emb1187 | Protein kinase superfamily protein | chr2:11443599-11446958 FORWARD LENGTH=374 |
| NR |
gb|ACG37870.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
477 |
174 |
472 |
e-148 |
81.3 |
53.2 |
58.1 |
| Subject |
388 |
57 |
352 |
|
| Annot |
choline/ethanolamine kinase [Zea mays] |
| IRGSP |
Os09t0438400-00_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
477 |
175 |
472 |
e-146 |
87.6 |
50.5 |
58.1 |
| Subject |
418 |
88 |
382 |
|
| Annot |
|
| Sbicolor |
Sobic.002G214400.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
477 |
175 |
472 |
e-142 |
82 |
49.9 |
56.4 |
| Subject |
391 |
61 |
355 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00018.1.g04660.1.sm.mkhc |
length: 477 aa. |
| IPR011009 |
Protein kinase-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
4.5e-76 |
169-469 |
| IPR026712 |
Choline/Ethanolamine kinase |
| Molecular Function |
GO:0016301 |
kinase activity |
|
|
| Biological Process |
GO:0046474 |
glycerophospholipid biosynthetic process |
|
|
| HMMPanther |
PTHR22603 |
CHOLINE/ETHANOALAMINE |
1.7e-166 |
175-463 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.450.110 |
no description |
8.5e-19 |
174-254 |
| Gene3D |
G3DSA:3.90.1200.10 |
no description |
1.9e-64 |
255-465 |
| HMMPanther |
PTHR22603:SF12 |
CHOLINE/ETHANOLAMINE |
1.7e-166 |
175-463 |
| HMMPfam |
PF01633 |
Choline_kinase |
2.8e-60 |
217-415 |
| Seg |
seg |
seg |
NA |
152-174 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 10880869 | 10885037 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00018.1 |
maker |
exon |
2012108 |
2012152 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:12 |
| Zjn_sc00018.1 |
maker |
exon |
2012294 |
2012386 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:11 |
| Zjn_sc00018.1 |
maker |
exon |
2012971 |
2013037 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:10 |
| Zjn_sc00018.1 |
maker |
exon |
2013125 |
2013230 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:9 |
| Zjn_sc00018.1 |
maker |
exon |
2013324 |
2013408 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:8 |
| Zjn_sc00018.1 |
maker |
exon |
2013760 |
2013851 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:7 |
| Zjn_sc00018.1 |
maker |
exon |
2013961 |
2014083 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:6 |
| Zjn_sc00018.1 |
maker |
exon |
2014258 |
2014363 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:5 |
| Zjn_sc00018.1 |
maker |
exon |
2014777 |
2014883 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:4 |
| Zjn_sc00018.1 |
maker |
exon |
2015364 |
2015455 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:3 |
| Zjn_sc00018.1 |
maker |
exon |
2015525 |
2015537 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:2 |
| Zjn_sc00018.1 |
maker |
exon |
2015772 |
2016276 |
. |
- |
. |
ID=Zjn_sc00018.1.g04660.1.sm.mkhc:exon:1 |