Z. japonica Nagirizaki
Zjn_sc00018.1.g04140.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G50480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 441 3 317 e-151 143.8 59.2 64.6
Subject 634 2 316
Annot | Symbols: THFS | 10-formyltetrahydrofolate synthetase | chr1:18702064-18704687 FORWARD LENGTH=634
NR ref|NP_001292743.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 441 1 317 e-162 166.2 66.7 68.5
Subject 733 99 415
Annot formate--tetrahydrofolate ligase [Zea mays]
IRGSP Os09t0446800-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 441 2 317 e-163 160.3 66.9 68.5
Subject 707 74 389
Annot
Sbicolor Sobic.002G220200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 441 1 317 e-163 170.3 66.7 68.3
Subject 751 117 433
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g04140.1.sm.mkhc length: 441 aa.
IPR000559 Formate-tetrahydrofolate ligase, FTHFS
method AccNumber shortName E-value location
Molecular Function GO:0004329 formate-tetrahydrofolate ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009396 folic acid-containing compound biosynthetic process    
HMMPfam PF01268 FTHFS 2e-33 16-307
351-441
IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site
Molecular Function GO:0004329 formate-tetrahydrofolate ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009396 folic acid-containing compound biosynthetic process    
PatternScan PS00721 FTHFS_1 NA 118-128
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.2e-38 18-307
309-439
no_ID  
Gene3D G3DSA:3.10.410.10 no description 2.1e-27 354-416
Gene3D G3DSA:3.30.1510.10 no description 2.3e-51 219-308
Gene3D G3DSA:3.40.50.300 no description 1e-07 28-146
309-353
HMMPanther PTHR24508 FAMILY 4.5e-302 1-441
HMMPanther PTHR24508:SF5 SUBFAMILY 4.5e-302 1-441
Seg seg seg NA 121-127
147-161
Pseudomolecule
Chromosome Start End Strand
201109050011094119+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker exon 1803026 1803537 . - . ID=Zjn_sc00018.1.g04140.1.sm.mkhc:exon:5
Zjn_sc00018.1 maker exon 1804615 1804739 . - . ID=Zjn_sc00018.1.g04140.1.sm.mkhc:exon:4
Zjn_sc00018.1 maker exon 1805175 1805790 . - . ID=Zjn_sc00018.1.g04140.1.sm.mkhc:exon:3
Zjn_sc00018.1 maker exon 1806244 1806393 . - . ID=Zjn_sc00018.1.g04140.1.sm.mkhc:exon:2
Zjn_sc00018.1 maker exon 1806487 1806645 . - . ID=Zjn_sc00018.1.g04140.1.sm.mkhc:exon:1

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