Z. japonica Nagirizaki
Zjn_sc00018.1.g03890.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G05170.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
336 |
2 |
336 |
e-121 |
120.2 |
66.4 |
80.1 |
| Subject |
404 |
4 |
404 |
|
| Annot |
| Symbols: | Galactosyltransferase family protein | chr1:1491460-1493931 REVERSE LENGTH=404 |
| NR |
ref|XP_002462477.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
336 |
1 |
336 |
e-154 |
122 |
86.3 |
91.7 |
| Subject |
410 |
1 |
410 |
|
| Annot |
hypothetical protein SORBIDRAFT_02g026360 [Sorghum bicolor] gi|241925854|gb|EER98998.1| hypothetical protein SORBIDRAFT_02g026360 [Sorghum bicolor] |
| IRGSP |
Os09t0452900-01_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
336 |
1 |
336 |
e-155 |
117 |
85.7 |
91.4 |
| Subject |
393 |
1 |
393 |
|
| Annot |
|
| Sbicolor |
Sobic.002G222800.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
336 |
1 |
336 |
e-159 |
117.3 |
87.5 |
92.3 |
| Subject |
394 |
1 |
394 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00018.1.g03890.1.am.mkhc |
length: 336 aa. |
| IPR002659 |
Glycosyl transferase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[9-330] |
5.6e-195 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
1.4e-30 |
139-278 |
| IPR025298 |
Domain of unknown function DUF4094 |
| HMMPfam |
PF13334 |
DUF4094 |
8.2e-10 |
16-76 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF66 |
SUBFAMILY |
5.6e-195 |
9-330 |
| Seg |
seg |
seg |
NA |
10-21 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 11191420 | 11195090 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00018.1 |
maker |
exon |
1702055 |
1702158 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:1 |
| Zjn_sc00018.1 |
maker |
exon |
1702291 |
1702390 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:2 |
| Zjn_sc00018.1 |
maker |
exon |
1703014 |
1703176 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:3 |
| Zjn_sc00018.1 |
maker |
exon |
1703372 |
1703421 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:4 |
| Zjn_sc00018.1 |
maker |
exon |
1703915 |
1704035 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:5 |
| Zjn_sc00018.1 |
maker |
exon |
1704128 |
1704215 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:6 |
| Zjn_sc00018.1 |
maker |
exon |
1704315 |
1704440 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:7 |
| Zjn_sc00018.1 |
maker |
exon |
1704577 |
1704686 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:8 |
| Zjn_sc00018.1 |
maker |
exon |
1704787 |
1705725 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03890.1.am.mkhc:exon:9 |