Z. japonica Nagirizaki
Zjn_sc00018.1.g03670.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G56850.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 10 322 2e-35 82.5 33.6 46.4
Subject 297 3 275
Annot | Symbols: AREB3, DPBF3 | ABA-responsive element binding protein 3 | chr3:21046554-21047894 REVERSE LENGTH=297
NR ref|XP_004957010.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 327 e-105 98.6 70.3 74.2
Subject 355 1 330
Annot PREDICTED: bZIP transcription factor TRAB1-like [Setaria italica]
IRGSP Os09t0456200-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 327 e-105 104.4 65 71.1
Subject 376 13 351
Annot
Sbicolor Sobic.002G225100.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 360 1 327 e-108 101.7 70.3 74.7
Subject 366 1 341
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g03670.1.sm.mkhc length: 360 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 3.5e-11 273-323
HMMSmart SM00338 basic 1.4e-09 269-328
PatternScan PS00036 BZIP_BASIC NA 276-291
ProfileScan PS50217 BZIP 11.553 271-323
no_ID  
Coil coil coiled-coil NA 289-327
Gene3D G3DSA:1.20.5.170 no description 6.7e-13 268-323
HMMPanther PTHR22952 CAMP-RESPONSE 1.5e-156 1-327
HMMPanther PTHR22952:SF56 TGA1, 1.5e-156 1-327
Seg seg seg NA 5-16
42-52
77-90
95-108
158-176
188-194
202-213
255-266
Pseudomolecule
Chromosome Start End Strand
201128937011292695+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker exon 1604450 1604551 . - . ID=Zjn_sc00018.1.g03670.1.sm.mkhc:exon:4
Zjn_sc00018.1 maker exon 1606066 1606095 . - . ID=Zjn_sc00018.1.g03670.1.sm.mkhc:exon:3
Zjn_sc00018.1 maker exon 1606523 1606594 . - . ID=Zjn_sc00018.1.g03670.1.sm.mkhc:exon:2
Zjn_sc00018.1 maker exon 1606897 1607775 . - . ID=Zjn_sc00018.1.g03670.1.sm.mkhc:exon:1

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