Z. japonica Nagirizaki
Zjn_sc00018.1.g03200.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G33580.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
255 |
56 |
255 |
6e-74 |
118 |
50.6 |
64.3 |
| Subject |
301 |
80 |
301 |
|
| Annot |
| Symbols: ATBCA5, BCA5 | beta carbonic anhydrase 5 | chr4:16139406-16141363 FORWARD LENGTH=301 |
| NR |
ref|XP_004957059.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
255 |
18 |
255 |
e-117 |
120.8 |
80 |
88.2 |
| Subject |
308 |
52 |
308 |
|
| Annot |
PREDICTED: beta carbonic anhydrase 5, chloroplastic-like isoform X2 [Setaria italica] |
| IRGSP |
Os09t0464000-02_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
255 |
18 |
255 |
e-114 |
120 |
75.7 |
85.1 |
| Subject |
306 |
47 |
306 |
|
| Annot |
|
| Sbicolor |
Sobic.002G230100.4.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
255 |
18 |
255 |
e-120 |
120 |
78.8 |
89.4 |
| Subject |
306 |
50 |
306 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00018.1.g03200.1.sm.mkhc |
length: 255 aa. |
| IPR001765 |
Carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Gene3D |
G3DSA:3.40.1050.10 |
no description |
6.2e-51 |
54-233 |
| HMMPanther |
PTHR11002 |
FAMILY |
3.4e-50 |
55-238 |
| HMMPfam |
PF00484 |
Pro_CA |
6.7e-31 |
92-224 |
| HMMSmart |
SM00947 |
Carbonic |
1.4e-34 |
84-233 |
| superfamily |
SSF53056 |
beta-carbonic |
2.8e-50 |
55-243 |
| IPR015892 |
Carbonic anhydrase, prokaryotic-like, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Biological Process |
GO:0015976 |
carbon utilization |
|
|
| PatternScan |
PS00704 |
PROK_CO2_ANHYDRASE_1 |
NA |
96-103 |
| no_ID |
|
| HMMPanther |
PTHR11002:SF1 |
SUBFAMILY |
3.4e-50 |
55-238 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 11487519 | 11490739 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00018.1 |
maker |
exon |
1406406 |
1406488 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:1 |
| Zjn_sc00018.1 |
maker |
exon |
1406763 |
1406790 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:2 |
| Zjn_sc00018.1 |
maker |
exon |
1407298 |
1407459 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:3 |
| Zjn_sc00018.1 |
maker |
exon |
1407559 |
1407607 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:4 |
| Zjn_sc00018.1 |
maker |
exon |
1407705 |
1407818 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:5 |
| Zjn_sc00018.1 |
maker |
exon |
1408102 |
1408184 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:6 |
| Zjn_sc00018.1 |
maker |
exon |
1408281 |
1408383 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:7 |
| Zjn_sc00018.1 |
maker |
exon |
1408618 |
1409626 |
. |
+ |
. |
ID=Zjn_sc00018.1.g03200.1.sm.mkhc:exon:8 |